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基于合成生物学创新技术,在阳离子(Q)纸上检测蚊子体内的基孔肯雅病毒RNA 。

Detection of chikungunya viral RNA in mosquito bodies on cationic (Q) paper based on innovations in synthetic biology.

作者信息

Glushakova Lyudmyla G, Alto Barry W, Kim Myong Sang, Bradley Andrea, Yaren Ozlem, Benner Steven A

机构信息

Firebird Biomolecular Sciences LLC,13709 Progress Blvd, Box 17, Alachua, FL 32615, United States.

Florida Medical Entomology Laboratory, University of Florida, 200 9th Street SE, Vero Beach, FL 32962, United States.

出版信息

J Virol Methods. 2017 Aug;246:104-111. doi: 10.1016/j.jviromet.2017.04.013. Epub 2017 Apr 27.

Abstract

Chikungunya virus (CHIKV) represents a growing and global concern for public health that needs inexpensive and convenient methods to collect mosquitoes as potential carriers so that they can be preserved, stored and transported for later and/or remote analysis. Reported here is a cellulose-based paper, derivatized with quaternary ammonium groups ("Q-paper") that meets these needs. In a series of tests, infected mosquito bodies were squashed directly on Q-paper. Aqueous ammonia was then added on the mosquito bodies to release viral RNA that adsorbed on the cationic surface via electrostatic interactions. The samples were then stored (frozen) or transported. For analysis, the CHIKV nucleic acids were eluted from the Q-paper and PCR amplified in a workflow, previously developed, that also exploited two nucleic acid innovations, ("artificially expanded genetic information systems", AEGIS, and "self-avoiding molecular recognition systems", SAMRS). The amplicons were then analyzed by a Luminex hybridization assay. This procedure detected CHIKV RNA, if present, in each infected mosquito sample, but not in non-infected counterparts or ddHO samples washes, with testing one week or ten months after sample collection.

摘要

基孔肯雅病毒(CHIKV)对公共卫生构成了日益严重的全球性威胁,需要采用廉价且便捷的方法来收集作为潜在传播媒介的蚊子,以便对其进行保存、储存和运输,用于后续和/或远程分析。本文报道了一种基于纤维素的纸张,经季铵基团衍生化处理(“Q纸”),可满足这些需求。在一系列测试中,将感染病毒的蚊子尸体直接挤压在Q纸上。然后在蚊子尸体上添加氨水,以释放通过静电相互作用吸附在阳离子表面的病毒RNA。随后对样本进行储存(冷冻)或运输。为了进行分析,从Q纸上洗脱基孔肯雅病毒核酸,并按照先前开发的工作流程进行PCR扩增,该流程还利用了两项核酸创新技术(“人工扩展遗传信息系统”,AEGIS,以及“自回避分子识别系统”,SAMRS)。然后通过Luminex杂交试验对扩增产物进行分析。该程序在每个感染蚊子样本中均检测到了基孔肯雅病毒RNA(如果存在),但在未感染的对应样本或ddHO样本洗涤液中未检测到,样本采集后一周或十个月进行检测均是如此。

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