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嗜中温产碱杆菌的乙醇脱氢酶基因:亚克隆、在大肠杆菌中的异源表达、测序及Tn5插入位点定位

Alcohol dehydrogenase gene from Alcaligenes eutrophus: subcloning, heterologous expression in Escherichia coli, sequencing, and location of Tn5 insertions.

作者信息

Jendrossek D, Steinbüchel A, Schlegel H G

机构信息

Institut für Mikrobiologie der Georg-August-Universität Göttingen, Federal Republic of Germany.

出版信息

J Bacteriol. 1988 Nov;170(11):5248-56. doi: 10.1128/jb.170.11.5248-5256.1988.

Abstract

The nucleotide sequence of the gene that encodes the fermentative, multifunctional alcohol dehydrogenase (ADH) in Alcaligenes eutrophus, and of adjacent regions on a 1.8-kilobase-pair PstI fragment was determined. From the deduced amino acid sequence, a molecular weight of 38,549 was calculated for the ADH subunit. The amino acid sequence reveals homologies from 22.3 to 26.3% with zinc-containing alcohol dehydrogenases from eucaryotic organisms (Schizosaccharomyces pombe, Zea mays, mouse, horse liver, and human liver). Most of the 22 amino acid residues, which are strictly conserved in this group of ADHs (H. Jörnvall, B. Persson, and J. Jeffery, Eur. J. Biochem. 167:195-201, 1987), either were present in the A. eutrophus enzyme or had been substituted by related amino acids. The A. eutrophus adh gene was transcribed in Escherichia coli only under the control of the lac promoter, but was not expressed by its own promoter. A sequence resembling the E. coli consensus promoter DNA sequence did not contain the invariant T, but a G, in the potential -10 region. In the transposon-induced mutants HC1409 and HC1421, which form ADH constitutively, the insertions of Tn5::mob were localized 56 and 66 base pairs, respectively, upstream of the presumptive translation initiation codon. In contrast to the promoter, the A. eutrophus ribosome-binding site with a GGAG Shine-Dalgarno sequence 6 base pairs upstream of the translation initiation codon was accepted by the E. coli translation apparatus. A stable hairpin structure, which may provide a transcription termination signal, is predicted to occur in the mRNA, with its starting point 21 base pairs downstream from the translation termination codon.

摘要

测定了真养产碱菌中编码发酵性多功能乙醇脱氢酶(ADH)的基因以及一个1.8千碱基对PstI片段上相邻区域的核苷酸序列。根据推导的氨基酸序列,计算出ADH亚基的分子量为38549。氨基酸序列显示与真核生物(粟酒裂殖酵母、玉米、小鼠、马肝和人肝)含锌乙醇脱氢酶有22.3%至26.3%的同源性。在这组ADH中严格保守的22个氨基酸残基(H. 约恩瓦尔、B. 佩尔松和J. 杰弗里,《欧洲生物化学杂志》167:195 - 201,1987),要么存在于真养产碱菌的酶中,要么被相关氨基酸替代。真养产碱菌的adh基因仅在lac启动子的控制下在大肠杆菌中转录,但不由其自身启动子表达。一个类似于大肠杆菌共有启动子DNA序列的序列在潜在的 -10区域不含不变的T,而是一个G。在组成型形成ADH的转座子诱导突变体HC1409和HC1421中,Tn5::mob的插入分别定位在推定翻译起始密码子上游56和66个碱基对处。与启动子不同,真养产碱菌的核糖体结合位点在翻译起始密码子上游6个碱基对处有一个GGAG的Shine - Dalgarno序列,能被大肠杆菌翻译装置接受。预计在mRNA中会出现一个稳定的发夹结构,其起始点在翻译终止密码子下游21个碱基对处,该结构可能提供转录终止信号。

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