Department of Enterprise Platforms and Integration Concepts, Hasso Plattner Institute, August-Bebel-Strasse 88, Potsdam 14482, Germany.
Nucleic Acids Res. 2017 Jul 3;45(W1):W478-W483. doi: 10.1093/nar/gkx363.
Researchers usually query the large biomedical literature in PubMed via keywords, logical operators and filters, none of which is very intuitive. Question answering systems are an alternative to keyword searches. They allow questions in natural language as input and results reflect the given type of question, such as short answers and summaries. Few of those systems are available online but they experience drawbacks in terms of long response times and they support a limited amount of question and result types. Additionally, user interfaces are usually restricted to only displaying the retrieved information. For our Olelo web application, we combined biomedical literature and terminologies in a fast in-memory database to enable real-time responses to researchers' queries. Further, we extended the built-in natural language processing features of the database with question answering and summarization procedures. Combined with a new explorative approach of document filtering and a clean user interface, Olelo enables a fast and intelligent search through the ever-growing biomedical literature. Olelo is available at http://www.hpi.de/plattner/olelo.
研究人员通常通过关键词、逻辑运算符和过滤器在 PubMed 中查询大型生物医学文献,但这些都不是很直观。问答系统是关键词搜索的一种替代方法。它们允许以自然语言输入问题,结果反映给定类型的问题,例如简短回答和摘要。在线上有一些问答系统,但它们存在响应时间长和支持的问题及结果类型有限的缺点。此外,用户界面通常仅限于显示检索到的信息。对于我们的 Olelo 网络应用程序,我们将生物医学文献和术语结合在一个快速的内存数据库中,以实现对研究人员查询的实时响应。此外,我们通过问答和总结过程扩展了数据库内置的自然语言处理功能。结合新的文档过滤探索方法和简洁的用户界面,Olelo 可以通过不断增长的生物医学文献进行快速智能搜索。Olelo 可在 http://www.hpi.de/plattner/olelo 上获得。