相似文献
1
Challenges and emerging directions in single-cell analysis.
Genome Biol. 2017 May 8;18(1):84. doi: 10.1186/s13059-017-1218-y.
2
Mapping gene regulatory networks from single-cell omics data.
Brief Funct Genomics. 2018 Jul 1;17(4):246-254. doi: 10.1093/bfgp/elx046.
3
Computational Methods for Single-cell DNA Methylome Analysis.
Genomics Proteomics Bioinformatics. 2023 Feb;21(1):48-66. doi: 10.1016/j.gpb.2022.05.007. Epub 2022 Jun 17.
4
Advances and applications in single-cell and spatial genomics.
Sci China Life Sci. 2024 Dec 20. doi: 10.1007/s11427-024-2770-x.
5
Human organomics: a fresh approach to understanding human development using single-cell transcriptomics.
Development. 2017 May 1;144(9):1584-1587. doi: 10.1242/dev.150458.
6
Single-Cell Omics Analyses Enabled by Microchip Technologies.
Annu Rev Biomed Eng. 2019 Jun 4;21:365-393. doi: 10.1146/annurev-bioeng-060418-052538. Epub 2019 Mar 18.
7
Single-cell epigenomics: Recording the past and predicting the future.
Science. 2017 Oct 6;358(6359):69-75. doi: 10.1126/science.aan6826.
8
Feature selection revisited in the single-cell era.
Genome Biol. 2021 Dec 1;22(1):321. doi: 10.1186/s13059-021-02544-3.
9
Lineage tracing meets single-cell omics: opportunities and challenges.
Nat Rev Genet. 2020 Jul;21(7):410-427. doi: 10.1038/s41576-020-0223-2. Epub 2020 Mar 31.
10
Transcriptional mechanisms of cell fate decisions revealed by single cell expression profiling.
Bioessays. 2014 Apr;36(4):419-26. doi: 10.1002/bies.201300102. Epub 2014 Jan 28.
引用本文的文献
1
Multi-Transcriptomic Analysis Reveals GSC-Driven MES-Like Differentiation via EMT in GBM Cell-Cell Communication.
Biomedicines. 2025 May 26;13(6):1304. doi: 10.3390/biomedicines13061304.
2
Advances and challenges in cell-cell communication inference: a comprehensive review of tools, resources, and future directions.
Brief Bioinform. 2025 May 1;26(3). doi: 10.1093/bib/bbaf280.
3
Gene set optimization for single cell transcriptomics.
Comput Intell Methods Bioinform Biostat. 2025;15276:183-195. doi: 10.1007/978-3-031-89704-7_14. Epub 2025 May 15.
4
Harnessing agent-based frameworks in CellAgentChat to unravel cell-cell interactions from single-cell and spatial transcriptomics.
Genome Res. 2025 Jun 2. doi: 10.1101/gr.279771.124.
5
Mass Spectrometry-based Single-Cell Lipidomics: Advancements, Challenges, and the Path Forward.
Trends Analyt Chem. 2023 Dec;169. doi: 10.1016/j.trac.2023.117350. Epub 2023 Oct 5.
6
Graph neural networks for single-cell omics data: a review of approaches and applications.
Brief Bioinform. 2025 Mar 4;26(2). doi: 10.1093/bib/bbaf109.
7
Design and fabrication of novel microfluidic-based droplets for drug screening on a chronic myeloid leukemia cell line.
PLoS One. 2025 Jan 15;20(1):e0315803. doi: 10.1371/journal.pone.0315803. eCollection 2025.
8
Advancements in the Application of scRNA-Seq in Breast Research: A Review.
Int J Mol Sci. 2024 Dec 22;25(24):13706. doi: 10.3390/ijms252413706.
9
Innovative Insights into Single-Cell Technologies and Multi-Omics Integration in Livestock and Poultry.
Int J Mol Sci. 2024 Dec 2;25(23):12940. doi: 10.3390/ijms252312940.
10
Long-term tracing of individual human neural cells using multiphoton microscopy and photoconvertible polymer capsules.
J R Soc Interface. 2024 Oct;21(219):20240497. doi: 10.1098/rsif.2024.0497. Epub 2024 Oct 30.
本文引用的文献
1
Dirichlet Process Mixture Model for Correcting Technical Variation in Single-Cell Gene Expression Data.
JMLR Workshop Conf Proc. 2016;48:1070-1079.
2
Quantitative Analysis of Synthetic Cell Lineage Tracing Using Nuclease Barcoding.
ACS Synth Biol. 2017 Jun 16;6(6):936-942. doi: 10.1021/acssynbio.6b00309. Epub 2017 Mar 10.
3
Power analysis of single-cell RNA-sequencing experiments.
Nat Methods. 2017 Apr;14(4):381-387. doi: 10.1038/nmeth.4220. Epub 2017 Mar 6.
4
Recent progress in single-cell cancer genomics.
Curr Opin Genet Dev. 2017 Feb;42:22-32. doi: 10.1016/j.gde.2017.01.002. Epub 2017 Jan 23.
5
Pooled CRISPR screening with single-cell transcriptome readout.
Nat Methods. 2017 Mar;14(3):297-301. doi: 10.1038/nmeth.4177. Epub 2017 Jan 18.
6
Dissecting Immune Circuits by Linking CRISPR-Pooled Screens with Single-Cell RNA-Seq.
Cell. 2016 Dec 15;167(7):1883-1896.e15. doi: 10.1016/j.cell.2016.11.039.
7
A Multiplexed Single-Cell CRISPR Screening Platform Enables Systematic Dissection of the Unfolded Protein Response.
Cell. 2016 Dec 15;167(7):1867-1882.e21. doi: 10.1016/j.cell.2016.11.048.
8
Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens.
Cell. 2016 Dec 15;167(7):1853-1866.e17. doi: 10.1016/j.cell.2016.11.038.
9
Rapidly evolving homing CRISPR barcodes.
Nat Methods. 2017 Feb;14(2):195-200. doi: 10.1038/nmeth.4108. Epub 2016 Dec 5.
10
Revealing the vectors of cellular identity with single-cell genomics.
Nat Biotechnol. 2016 Nov 8;34(11):1145-1160. doi: 10.1038/nbt.3711.
Zotero 插件