• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

具有重复测量的遗传力分析及其在静息状态功能连接中的应用。

Heritability analysis with repeat measurements and its application to resting-state functional connectivity.

机构信息

Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Harvard Medical School, Charlestown, MA 02129;

Psychiatric and Neurodevelopmental Genetics Unit, Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA 02114.

出版信息

Proc Natl Acad Sci U S A. 2017 May 23;114(21):5521-5526. doi: 10.1073/pnas.1700765114. Epub 2017 May 8.

DOI:10.1073/pnas.1700765114
PMID:28484032
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5448225/
Abstract

Heritability, defined as the proportion of phenotypic variation attributable to genetic variation, provides important information about the genetic basis of a trait. Existing heritability analysis methods do not discriminate between stable effects (e.g., due to the subject's unique environment) and transient effects, such as measurement error. This can lead to misleading assessments, particularly when comparing the heritability of traits that exhibit different levels of reliability. Here, we present a linear mixed effects model to conduct heritability analyses that explicitly accounts for intrasubject fluctuations (e.g., due to measurement noise or biological transients) using repeat measurements. We apply the proposed strategy to the analysis of resting-state fMRI measurements-a prototypic data modality that exhibits variable levels of test-retest reliability across space. Our results reveal that the stable components of functional connectivity within and across well-established large-scale brain networks can be considerably heritable. Furthermore, we demonstrate that dissociating intra- and intersubject variation can reveal genetic influence on a phenotype that is not fully captured by conventional heritability analyses.

摘要

遗传力定义为表型变异归因于遗传变异的比例,提供了关于特征遗传基础的重要信息。现有的遗传力分析方法不能区分稳定效应(例如,由于个体的独特环境)和瞬态效应,如测量误差。这可能导致误导性评估,特别是在比较表现出不同可靠性水平的特征的遗传力时。在这里,我们提出了一种线性混合效应模型,该模型使用重复测量来进行遗传力分析,明确考虑了个体内波动(例如,由于测量噪声或生物瞬变)。我们将提出的策略应用于静息态 fMRI 测量的分析——这是一种典型的数据模式,在空间上表现出不同的测试-重测可靠性水平。我们的结果表明,在既定的大脑大网络内和跨网络的功能连接的稳定成分具有相当大的遗传性。此外,我们证明,区分个体内和个体间的变异可以揭示遗传对表型的影响,而传统的遗传力分析并不能完全捕捉到这种影响。

相似文献

1
Heritability analysis with repeat measurements and its application to resting-state functional connectivity.具有重复测量的遗传力分析及其在静息状态功能连接中的应用。
Proc Natl Acad Sci U S A. 2017 May 23;114(21):5521-5526. doi: 10.1073/pnas.1700765114. Epub 2017 May 8.
2
Resting-state test-retest reliability of a priori defined canonical networks over different preprocessing steps.不同预处理步骤下先验定义的典型网络的静息态重测信度。
Brain Struct Funct. 2017 Apr;222(3):1447-1468. doi: 10.1007/s00429-016-1286-x. Epub 2016 Aug 22.
3
Test-retest reliabilities of resting-state FMRI measurements in human brain functional connectomics: a systems neuroscience perspective.人脑功能连接组学中静息态功能磁共振成像测量的重测信度:系统神经科学视角
Neurosci Biobehav Rev. 2014 Sep;45:100-18. doi: 10.1016/j.neubiorev.2014.05.009. Epub 2014 May 27.
4
Manipulating brain connectivity with δ⁹-tetrahydrocannabinol: a pharmacological resting state FMRI study.用 δ⁹-四氢大麻酚操纵大脑连接:一项药物静息态 fMRI 研究。
Neuroimage. 2012 Nov 15;63(3):1701-11. doi: 10.1016/j.neuroimage.2012.07.051. Epub 2012 Aug 1.
5
Model based heritability scores for high-throughput sequencing data.基于模型的高通量测序数据遗传力评分
BMC Bioinformatics. 2017 Mar 2;18(1):143. doi: 10.1186/s12859-017-1539-6.
6
Quantifying temporal correlations: a test-retest evaluation of functional connectivity in resting-state fMRI.量化时间相关性:静息态 fMRI 功能连接的复测评估。
Neuroimage. 2013 Jan 15;65:231-41. doi: 10.1016/j.neuroimage.2012.09.052. Epub 2012 Sep 29.
7
Functional connectivity in the rat at 11.7T: Impact of physiological noise in resting state fMRI.在 11.7T 下大鼠的功能连接:静息态 fMRI 中生理噪声的影响。
Neuroimage. 2011 Feb 14;54(4):2828-39. doi: 10.1016/j.neuroimage.2010.10.053. Epub 2010 Oct 23.
8
Errors on interrupter tasks presented during spatial and verbal working memory performance are linearly linked to large-scale functional network connectivity in high temporal resolution resting state fMRI.在空间和言语工作记忆表现期间呈现的中断任务上的错误,与高时间分辨率静息态功能磁共振成像中的大规模功能网络连通性呈线性相关。
Brain Imaging Behav. 2015 Dec;9(4):854-67. doi: 10.1007/s11682-014-9347-3.
9
Changes in structural and functional connectivity among resting-state networks across the human lifespan.人类一生中静息态网络间结构和功能连接性的变化。
Neuroimage. 2014 Nov 15;102 Pt 2:345-57. doi: 10.1016/j.neuroimage.2014.07.067. Epub 2014 Aug 7.
10
Detecting functional connectivity in fMRI using PCA and regression analysis.使用主成分分析(PCA)和回归分析检测功能磁共振成像(fMRI)中的功能连接性。
Brain Topogr. 2009 Sep;22(2):134-44. doi: 10.1007/s10548-009-0095-4. Epub 2009 May 1.

引用本文的文献

1
Functional connectivity heterogeneity and consequences for clinical and cognitive prediction: Stage 2 registered report.功能连接异质性及其对临床和认知预测的影响:第二阶段注册报告
Imaging Neurosci (Camb). 2025 Aug 12;3. doi: 10.1162/IMAG.a.107. eCollection 2025.
2
Heritability and genetic contribution analysis of structural-functional coupling in human brain.人类大脑结构-功能耦合的遗传力与遗传贡献分析
Imaging Neurosci (Camb). 2024 Oct 30;2. doi: 10.1162/imag_a_00346. eCollection 2024.
3
Distinct genetic underpinnings of inter-individual differences in the sensorimotor-association axis of cortical organisation.皮质组织感觉运动关联轴个体间差异的独特遗传基础。
bioRxiv. 2025 Jul 21:2023.07.13.548817. doi: 10.1101/2023.07.13.548817.
4
Polygenic Risk, Psychopathology, and Personalized Functional Brain Network Topography in Adolescence.青少年的多基因风险、精神病理学与个性化功能性脑网络拓扑结构
JAMA Psychiatry. 2025 Jun 25. doi: 10.1001/jamapsychiatry.2025.1258.
5
Genetic contributions to brain criticality and its relationship with human cognitive functions.基因对大脑临界性的贡献及其与人类认知功能的关系。
Proc Natl Acad Sci U S A. 2025 Jul;122(26):e2417010122. doi: 10.1073/pnas.2417010122. Epub 2025 Jun 23.
6
Innate network mechanisms of temporal pole for semantic cognition in neonatal and adult twin studies.新生儿和成人双胞胎研究中颞极语义认知的先天网络机制
Nat Commun. 2025 Apr 23;16(1):3835. doi: 10.1038/s41467-025-58896-y.
7
From air to mind: unraveling the impact of indoor pollutants on psychiatric disorders.从空气到大脑:揭示室内污染物对精神疾病的影响
Front Psychiatry. 2025 Jan 9;15:1511475. doi: 10.3389/fpsyt.2024.1511475. eCollection 2024.
8
Molecular mechanisms underlying the neural correlates of working memory.工作记忆的神经相关物的分子机制。
BMC Biol. 2024 Oct 21;22(1):238. doi: 10.1186/s12915-024-02039-0.
9
Polygenic Risk, Psychopathology, and Personalized Functional Brain Network Topography in Adolescence.青少年中的多基因风险、精神病理学与个性化功能性脑网络拓扑结构
medRxiv. 2025 Mar 21:2024.09.20.24314007. doi: 10.1101/2024.09.20.24314007.
10
Genetic fingerprinting with heritable phenotypes of the resting-state brain network topology.基于静息态脑网络拓扑结构的遗传性表型的遗传指纹识别。
Commun Biol. 2024 Sep 30;7(1):1221. doi: 10.1038/s42003-024-06807-0.

本文引用的文献

1
Multidimensional heritability analysis of neuroanatomical shape.神经解剖结构的多维遗传分析。
Nat Commun. 2016 Nov 15;7:13291. doi: 10.1038/ncomms13291.
2
Brain Genomics Superstruct Project initial data release with structural, functional, and behavioral measures.脑基因组学超级结构项目初始数据发布,包括结构、功能和行为测量。
Sci Data. 2015 Jul 7;2:150031. doi: 10.1038/sdata.2015.31. eCollection 2015.
3
Meta-analysis of the heritability of human traits based on fifty years of twin studies.基于五十年双胞胎研究的人类特征遗传力的荟萃分析。
Nat Genet. 2015 Jul;47(7):702-9. doi: 10.1038/ng.3285. Epub 2015 May 18.
4
Massively expedited genome-wide heritability analysis (MEGHA).大规模加速全基因组遗传力分析(MEGHA)
Proc Natl Acad Sci U S A. 2015 Feb 24;112(8):2479-84. doi: 10.1073/pnas.1415603112. Epub 2015 Feb 9.
5
Measuring missing heritability: inferring the contribution of common variants.测量缺失的遗传力:推断常见变异的贡献。
Proc Natl Acad Sci U S A. 2014 Dec 9;111(49):E5272-81. doi: 10.1073/pnas.1419064111. Epub 2014 Nov 24.
6
MSM: a new flexible framework for Multimodal Surface Matching.MSM:一种用于多模态表面匹配的新型灵活框架。
Neuroimage. 2014 Oct 15;100:414-26. doi: 10.1016/j.neuroimage.2014.05.069. Epub 2014 Jun 2.
7
Automatic denoising of functional MRI data: combining independent component analysis and hierarchical fusion of classifiers.功能磁共振成像数据的自动去噪:结合独立成分分析和分类器的分层融合
Neuroimage. 2014 Apr 15;90:449-68. doi: 10.1016/j.neuroimage.2013.11.046. Epub 2014 Jan 2.
8
Genetics of the connectome.连接组学的遗传学。
Neuroimage. 2013 Oct 15;80:475-88. doi: 10.1016/j.neuroimage.2013.05.013. Epub 2013 May 21.
9
Dynamic functional connectivity: promise, issues, and interpretations.动态功能连接:前景、问题与诠释。
Neuroimage. 2013 Oct 15;80:360-78. doi: 10.1016/j.neuroimage.2013.05.079. Epub 2013 May 24.
10
Resting-state fMRI in the Human Connectome Project.静息态功能磁共振成像在人类连接组计划中的应用。
Neuroimage. 2013 Oct 15;80:144-68. doi: 10.1016/j.neuroimage.2013.05.039. Epub 2013 May 20.