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HIERARCHICAL ANALYSIS OF INBREEDING DEPRESSION IN PEROMYSCUS POLIONOTUS.北美白足鼠近亲繁殖衰退的层次分析
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Genomics advances the study of inbreeding depression in the wild.基因组学推动了对野生近亲繁殖衰退的研究。
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Inbreeding depression by environment interactions in a free-living mammal population.自由生活的哺乳动物种群中近亲繁殖衰退与环境的相互作用
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A second transmissible cancer in Tasmanian devils.袋獾身上的第二种可传播癌症。
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Development of a SNP-based assay for measuring genetic diversity in the Tasmanian devil insurance population.开发一种基于单核苷酸多态性(SNP)的检测方法,用于测量袋獾保险种群的遗传多样性。
BMC Genomics. 2015 Oct 14;16:791. doi: 10.1186/s12864-015-2020-4.
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Measuring individual inbreeding in the age of genomics: marker-based measures are better than pedigrees.在基因组学时代测量个体近亲繁殖:基于标记的测量方法优于系谱法。
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Hatching asynchrony aggravates inbreeding depression in a songbird (Serinus canaria): an inbreeding-environment interaction.孵化异步加剧了一种鸣禽(金丝雀)的近亲繁殖衰退:一种近亲繁殖与环境的相互作用。
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Effects of food restriction across stages of juvenile and early adult development on body weight, survival and adult life history.在幼年和成年早期发育的各个阶段进行食物限制对体重、存活率和成年生活史的影响。
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尽管存在显著的近交程度变化,但塔斯马尼亚恶魔保险种群中没有近交衰退的证据。

No evidence of inbreeding depression in a Tasmanian devil insurance population despite significant variation in inbreeding.

机构信息

School of Life and Environmental Sciences, University of Sydney, Sydney, NSW, 2006, Australia.

Zoo and Aquarium Association Australasia, Mosman, NSW, 2088, Australia.

出版信息

Sci Rep. 2017 May 12;7(1):1830. doi: 10.1038/s41598-017-02000-y.

DOI:10.1038/s41598-017-02000-y
PMID:28500329
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5431960/
Abstract

Inbreeding depression occurs when inbred individuals experience reduced fitness as a result of reduced genome-wide heterozygosity. The Tasmanian devil faces extinction due to a contagious cancer, devil facial tumour disease (DFTD). An insurance metapopulation was established in 2006 to ensure the survival of the species and to be used as a source population for re-wilding and genetic rescue. The emergence of DFTD and the rapid decline of wild devil populations have rendered the species at risk of inbreeding depression. We used 33 microsatellite loci to (1) reconstruct a pedigree for the insurance population and (2) estimate genome-wide heterozygosity for 200 individuals. Using heterozygosity-fitness correlations, we investigated the effect of heterozygosity on six diverse fitness measures (ulna length, asymmetry, weight-at-weaning, testes volume, reproductive success and survival). Despite statistically significant evidence of variation in individual inbreeding in this population, we found no associations between inbreeding and any of our six fitness measurements. We propose that the benign environment in captivity may decrease the intensity of inbreeding depression, relative to the stressful conditions in the wild. Future work will need to measure fitness of released animals to facilitate translation of this data to the broader conservation management of the species in its native range.

摘要

当近交个体由于全基因组杂合性降低而导致适应度降低时,就会发生近交衰退。由于传染性癌症——袋獾面部肿瘤疾病(DFTD),塔斯马尼亚恶魔正面临灭绝。为了确保该物种的生存,并将其用作重新引入和遗传拯救的来源种群,2006 年建立了一个保险种群。DFTD 的出现和野生恶魔数量的迅速减少,使该物种面临近交衰退的风险。我们使用 33 个微卫星标记来:(1)为保险种群构建系谱;(2)估计 200 个个体的全基因组杂合度。利用杂合度与适应度的相关性,我们调查了杂合度对六个不同适应度指标(尺骨长度、不对称性、断奶体重、睾丸体积、繁殖成功率和存活率)的影响。尽管在该种群中存在个体近交程度的统计显著差异,但我们没有发现近交与我们六个适应度测量指标中的任何一个之间存在关联。我们提出,圈养环境中的良性环境可能会降低近交衰退的强度,而野生环境中的压力条件则会增加近交衰退的强度。未来的工作需要测量释放动物的适应度,以便将这些数据转化为该物种在其原生范围内的更广泛的保护管理。