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利用溶解 DNP NMR 光谱实时分析无规卷曲蛋白结合时的折叠情况。

Real-Time Analysis of Folding upon Binding of a Disordered Protein by Using Dissolution DNP NMR Spectroscopy.

机构信息

Department of Biochemistry & Biophysics, Texas A&M University, College Station, TX, 77843, USA.

Department of Biochemistry and Molecular Biology, University of Florida College of Medicine, Gainesville, FL, 32611, USA.

出版信息

Angew Chem Int Ed Engl. 2017 Jun 12;56(25):7070-7073. doi: 10.1002/anie.201700464. Epub 2017 May 16.

DOI:10.1002/anie.201700464
PMID:28508552
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5674774/
Abstract

The kinase inhibitory domain of the cell cycle regulatory protein p27 (p27) was nuclear spin hyperpolarized using dissolution dynamic nuclear polarization (D-DNP). While intrinsically disordered in isolation, p27 adopts secondary structural motifs, including an α-helical structure, upon binding to cyclin-dependent kinase 2 (Cdk2)/cyclin A. The sensitivity gains obtained with hyperpolarization enable the real-time observation of C NMR signals during p27 folding upon binding to Cdk2/cyclin A on a time scale of several seconds. Time-dependent intensity changes are dependent on the extent of folding and binding, as manifested in differential spin relaxation. The analysis of signal decay rates suggests the existence of a partially folded p27 intermediate during the timescale of the D-DNP NMR experiment.

摘要

细胞周期调控蛋白 p27 的激酶抑制结构域(p27)使用溶解动态核极化(D-DNP)实现核自旋超极化。p27 在与细胞周期蛋白依赖性激酶 2(Cdk2)/细胞周期蛋白 A 结合时,虽然在单独存在时是无规则卷曲的,但会采用二级结构模体,包括α-螺旋结构。通过极化获得的灵敏度提高使得能够在 p27 与 Cdk2/细胞周期蛋白 A 结合时,在几秒钟的时间尺度内实时观察到 C-NMR 信号的折叠。时间依赖性强度变化取决于折叠和结合的程度,表现在不同的自旋弛豫上。信号衰减速率的分析表明,在 D-DNP NMR 实验的时间尺度内存在部分折叠的 p27 中间产物。

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本文引用的文献

1
Investigation of Intrinsically Disordered Proteins through Exchange with Hyperpolarized Water.通过与超极化水交换来研究无规卷曲蛋白质。
Angew Chem Int Ed Engl. 2017 Jan 2;56(1):389-392. doi: 10.1002/anie.201608903. Epub 2016 Dec 5.
2
Wrecked regulation of intrinsically disordered proteins in diseases: pathogenicity of deregulated regulators.在疾病中,固有无序蛋白质的调节失控:失调调节剂的致病性。
Front Mol Biosci. 2014 Jul 25;1:6. doi: 10.3389/fmolb.2014.00006. eCollection 2014.
3
Intrinsically disordered proteins in cellular signalling and regulation.细胞信号转导和调控中的无规则卷曲蛋白
Nat Rev Mol Cell Biol. 2015 Jan;16(1):18-29. doi: 10.1038/nrm3920.
4
The triple power of D³: protein intrinsic disorder in degenerative diseases.D³ 的三重力量:退行性疾病中的蛋白质固有无序。
Front Biosci (Landmark Ed). 2014 Jan 1;19(2):181-258. doi: 10.2741/4204.
5
Protein folding studied by dissolution dynamic nuclear polarization.通过溶解动态核极化研究蛋白质折叠。
Angew Chem Int Ed Engl. 2013 Aug 26;52(35):9192-5. doi: 10.1002/anie.201301851. Epub 2013 Jul 15.
6
Marked variability in the extent of protein disorder within and between viral families.病毒科内和科间蛋白质无序程度存在明显差异。
PLoS One. 2013 Apr 19;8(4):e60724. doi: 10.1371/journal.pone.0060724. Print 2013.
7
Solution NMR of polypeptides hyperpolarized by dynamic nuclear polarization.通过动态核极化使多肽溶液高极化的溶液核磁共振谱。
Anal Chem. 2011 Aug 1;83(15):6054-9. doi: 10.1021/ac201122k. Epub 2011 Jun 30.
8
Backbone dynamics of proteins derived from carbonyl carbon relaxation times at 500, 600 and 800 MHz: Application to ribonuclease T1.从 500、600 和 800 MHz 的羰基碳弛豫时间得出的蛋白质的骨架动力学:在核糖核酸酶 T1 中的应用。
J Biomol NMR. 1997 Jan;9(1):63-78. doi: 10.1023/A:1018675618785.
9
Rapid sample injection for hyperpolarized NMR spectroscopy.快速样品注射用于高极化 NMR 光谱学。
Phys Chem Chem Phys. 2010 Jun 14;12(22):5766-70. doi: 10.1039/c002316g. Epub 2010 May 4.
10
Intrinsic protein disorder and interaction promiscuity are widely associated with dosage sensitivity.内在蛋白质无序和相互作用混杂与剂量敏感性广泛相关。
Cell. 2009 Jul 10;138(1):198-208. doi: 10.1016/j.cell.2009.04.029.