Guo Zhong-Peng, Duquesne Sophie, Bozonnet Sophie, Cioci Gianluca, Nicaud Jean-Marc, Marty Alain, O'Donohue Michael Joseph
Biocatalysis Group, INSA/INRA UMR 792, CNRS, LISBP, Université de Toulouse, 135, Avenue de Rangueil, 31077 Toulouse, France.
Micalis Institute, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, France.
Biotechnol Biofuels. 2017 May 19;10:132. doi: 10.1186/s13068-017-0819-8. eCollection 2017.
, one of the most widely studied "nonconventional" oleaginous yeast species, is unable to grow on cellulose. Recently, we identified and overexpressed two endogenous β-glucosidases in , thus enabling this yeast to use cello-oligosaccharides as a carbon source for growth. Using this engineered yeast platform, we have now gone further toward building a fully cellulolytic for use in consolidated bioprocessing of cellulose.
Initially, different essential enzyme components of a cellulase cocktail (i.e,. cellobiohydrolases and endoglucanases) were individually expressed in in order to ascertain the viability of the strategy. Accordingly, the endoglucanase I (EG I) and II (EG II) were secreted as active proteins in , with the secretion yield of EG II being twice that of EG I. Characterization of the purified His-tagged recombinant EG proteins (rhEGs) revealed that rhEG I displayed higher specific activity than rhEG II on both cellotriose and insoluble cellulosic substrates, such as Avicel, β-1, 3 glucan, β-1, 4 glucan, and PASC. Similarly, cellobiohydrolases, such as CBH I and II (CBH I and II), and the CBH I from (CBH I) were successfully expressed in However, the yield of the expressed CBH I was low, so work on this was not pursued. Contrastingly, rhCBH I was not only well expressed, but also highly active on PASC and more active on Avicel (0.11 U/mg) than wild-type CBH I (0.065 U/mg). Therefore, work was pursued using a combination of CBH I and CBH II. The quantification of enzyme levels in culture supernatants revealed that the use of a hybrid promoter instead of the primarily used TEF promoter procured four and eight times more CBH I and CBH II expressions, respectively. Finally, the coexpression of the previously described β-glucosidases, the CBH II, and EG I and II from , and the CBH I procured an engineered strain that was able to grow both on model cellulose substrates, such as highly crystalline Avicel, and on industrial cellulose pulp, such as that obtained using an organosolv process.
A strain coexpressing six cellulolytic enzyme components has been successfully developed. In addition, the results presented show how the recombinant strain can be optimized, for example, using artificial promoters to tailor expression levels. Most significantly, this study has provided a demonstration of how the strain can grow on a sample of industrial cellulose as sole carbon source, thus revealing the feasibility of -based consolidated bioprocess for the production of fuel and chemical precursors. Further, enzyme and strain optimization, coupled to appropriate process design, will undoubtedly lead to much better performances in the future.
作为研究最为广泛的“非常规”产油酵母之一,无法在纤维素上生长。最近,我们在中鉴定并过表达了两种内源性β-葡萄糖苷酶,从而使这种酵母能够利用纤维寡糖作为生长的碳源。利用这个工程酵母平台,我们现在朝着构建一种用于纤维素同步糖化发酵的完全纤维素分解菌又迈进了一步。
最初,为了确定该策略的可行性,在中分别表达了纤维素酶混合物的不同关键酶组分(即纤维二糖水解酶和内切葡聚糖酶)。相应地,内源性内切葡聚糖酶I(EG I)和II(EG II)在中作为活性蛋白分泌,EG II的分泌产量是EG I的两倍。对纯化的带有His标签的重组EG蛋白(rhEGs)的表征显示,rhEG I在纤维三糖和不溶性纤维素底物(如微晶纤维素、β-1,3-葡聚糖、β-1,4-葡聚糖和磷酸膨胀纤维素)上均表现出比rhEG II更高的比活性。同样,纤维二糖水解酶,如嗜热栖热放线菌CBH I和II(CBH I和II)以及来自热栖热放线菌的CBH I(CBH I)也在中成功表达。然而,表达的CBH I产量较低,因此未继续对此进行研究。相比之下,rhCBH I不仅表达良好,而且对磷酸膨胀纤维素具有高活性,对微晶纤维素的活性(0.11 U/mg)也高于野生型CBH I(0.065 U/mg)。因此,使用CBH I和CBH II的组合继续开展工作。对培养上清液中酶水平的定量分析表明,使用杂交启动子而非主要使用的TEF启动子分别使CBH I和CBH II的表达量提高了四倍和八倍。最后,将先前描述的β-葡萄糖苷酶、CBH II以及嗜热栖热放线菌的EG I和II以及热栖热放线菌的CBH I共表达,获得了一种工程菌株,该菌株能够在模型纤维素底物(如高度结晶的微晶纤维素)和工业纤维素浆(如通过有机溶剂法获得的纤维素浆)上生长。
已成功构建了一种共表达六种纤维素分解酶组分的菌株。此外,所呈现的结果展示了如何对重组菌株进行优化,例如使用人工启动子来调整表达水平。最为重要的是,本研究证明了该菌株能够以工业纤维素样品作为唯一碳源生长,从而揭示了基于该菌株的同步糖化发酵生产燃料和化学前体的可行性。此外,酶和菌株的优化,再结合适当的工艺设计,无疑将在未来带来更好的性能表现。