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通过人员流动模拟农场到农场的疾病传播:从访问到接触,再到返回。

Modelling farm-to-farm disease transmission through personnel movements: from visits to contacts, and back.

机构信息

Department of Pathobiology, College of Veterinary Medicine, University of Illinois, 2001 S. Lincoln Avenue, 61802, Urbana, IL, USA.

Risk Analysis Unit, Istituto Zooprofilattico Sperimentale della Lombardia e dell'Emilia-Romagna, Via dei Mercati, 13/A, I-43126, Parma, Italy.

出版信息

Sci Rep. 2017 May 24;7(1):2375. doi: 10.1038/s41598-017-02567-6.

Abstract

Infectious diseases in livestock can be transmitted through fomites: objects able to convey infectious agents. Between-farm spread of infections through fomites is mostly due to indirect contacts generated by on-farm visits of personnel that can carry pathogens on their clothes, equipment, or vehicles. However, data on farm visitors are often difficult to obtain because of the heterogeneity of their nature and privacy issues. Thus, models simulating disease spread between farms usually rely on strong assumptions about the contribution of indirect contacts on infection spread. By using data on veterinarian on-farm visits in a dairy farm system, we built a simple simulation model to assess the role of indirect contacts on epidemic dynamics compared to cattle movements (i.e. direct contacts). We showed that including in the simulation model only specific subsets of the information available on indirect contacts could lead to outputs widely different from those obtained with the full-information model. Then, we provided a simple preferential attachment algorithm based on the probability to observe consecutive on-farm visits from the same operator that allows overcoming the information gaps. Our results suggest the importance of detailed data and a deeper understanding of visit dynamics for the prevention and control of livestock diseases.

摘要

家畜传染病可通过媒介物传播

即能够携带传染因子的物体。农场间通过媒介物传播感染主要是由于人员在农场间的间接接触引起的,这些人员可能会将病原体带到他们的衣物、设备或车辆上。然而,由于农场访客性质的异质性和隐私问题,有关农场访客的数据通常难以获得。因此,模拟农场间疾病传播的模型通常依赖于对间接接触对感染传播的贡献的强烈假设。通过使用奶牛场系统中兽医农场访问的数据,我们构建了一个简单的模拟模型,以评估间接接触相对于牛群移动(即直接接触)对疫情动态的作用。我们表明,在模拟模型中仅包含有关间接接触的可用信息的特定子集可能会导致与使用完整信息模型获得的结果大不相同。然后,我们提供了一种简单的基于从同一操作人员连续农场访问的观察概率的优先附着算法,该算法可以克服信息缺口。我们的结果表明,对于预防和控制家畜疾病,详细的数据和对访问动态的深入了解非常重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4333/5443770/6b68c61655ba/41598_2017_2567_Fig1_HTML.jpg

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