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通过 DIGE 分析显示,外源性表达 FTO 野生型和 R316Q 突变型蛋白导致 3T3-L1 细胞中 HNRPK 水平升高。

Exogenous Expressions of FTO Wild-Type and R316Q Mutant Proteins Caused an Increase in HNRPK Levels in 3T3-L1 Cells as Demonstrated by DIGE Analysis.

机构信息

Department of Medical Biology, Kocaeli University Medical School, Umuttepe, 41380 Kocaeli, Turkey.

Department of Biomedical Engineering, Technology Faculty, Kocaeli University, Umuttepe, 41380 Kocaeli, Turkey.

出版信息

Biomed Res Int. 2017;2017:8216180. doi: 10.1155/2017/8216180. Epub 2017 May 7.

Abstract

Fat mass and obesity-associated protein is an enzyme that oxidatively demethylates DNA. Although there are numerous studies regarding the catalytic function of FTO, the overall existence or absence of FTO on cellular proteome has not been investigated. This study investigated the changes in the soluble proteome of 3T3-L1 cells upon expression of the WT and the mutant (R316Q) FTO proteins. Protein extracts prepared from 3T3-L1 cells expressing either the WT or the mutant FTO proteins were used in DIGE experiments. Analysis of the data revealed the number of spots matched to every member and there were 350 ± 20 spots with 30.5% overall mean coefficient of variation. Eleven regulated protein spots were excised from the gels and identified by MALDI-TOF/TOF. One of the identified proteins was heterogeneous nuclear ribonucleoprotein K, which displayed more than 2.6- and 3.7-fold increases in its abundance in the WT and the mutant FTO expressing cells, respectively. Western blot analysis validated these observations. This is the first study revealing the presence of a parallel increase in expressions of FTO and HNRNPK proteins. This increase may codictate the metabolic changes occurring in the cell and may attribute a significance to HNRNPK in FTO-associated transformations.

摘要

肥胖相关蛋白是一种能氧化去甲基化 DNA 的酶。尽管已有大量关于 FTO 催化功能的研究,但细胞蛋白质组中 FTO 的整体存在或缺失尚未得到研究。本研究调查了表达 WT 和突变型(R316Q)FTO 蛋白的 3T3-L1 细胞可溶性蛋白质组的变化。从表达 WT 或突变型 FTO 蛋白的 3T3-L1 细胞中提取的蛋白质提取物用于 DIGE 实验。数据分析显示,与每个成员匹配的斑点数量,有 350 ± 20 个斑点,总平均变异系数为 30.5%。从凝胶中切下 11 个受调控的蛋白斑点,并通过 MALDI-TOF/TOF 进行鉴定。鉴定出的一种蛋白质是异质核核糖核蛋白 K,其在 WT 和突变型 FTO 表达细胞中的丰度分别增加了 2.6 倍和 3.7 倍以上。Western blot 分析验证了这些观察结果。这是第一项揭示 FTO 和 HNRNPK 蛋白表达平行增加的研究。这种增加可能决定了细胞中发生的代谢变化,并可能使 HNRNPK 在 FTO 相关转化中具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d37/5438842/f23af9c3d223/BMRI2017-8216180.001.jpg

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