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改进的布谷鸟搜索算法在海马体微观图像分割中的应用

Modified cuckoo search algorithm in microscopic image segmentation of hippocampus.

作者信息

Chakraborty Shouvik, Chatterjee Sankhadeep, Dey Nilanjan, Ashour Amira S, Ashour Ahmed S, Shi Fuqian, Mali Kalyani

机构信息

Department of Computer Science and Engineering, University of Kalyani, Kolkata, India.

Department of Computer Science and Engineering, University of Calcutta, Kolkata, India.

出版信息

Microsc Res Tech. 2017 Oct;80(10):1051-1072. doi: 10.1002/jemt.22900. Epub 2017 May 30.

Abstract

Microscopic image analysis is one of the challenging tasks due to the presence of weak correlation and different segments of interest that may lead to ambiguity. It is also valuable in foremost meadows of technology and medicine. Identification and counting of cells play a vital role in features extraction to diagnose particular diseases precisely. Different segments should be identified accurately in order to identify and to count cells in a microscope image. Consequently, in the current work, a novel method for cell segmentation and identification has been proposed that incorporated marking cells. Thus, a novel method based on cuckoo search after pre-processing step is employed. The method is developed and evaluated on light microscope images of rats' hippocampus which used as a sample for the brain cells. The proposed method can be applied on the color images directly. The proposed approach incorporates the McCulloch's method for lévy flight production in cuckoo search (CS) algorithm. Several objective functions, namely Otsu's method, Kapur entropy and Tsallis entropy are used for segmentation. In the cuckoo search process, the Otsu's between class variance, Kapur's entropy and Tsallis entropy are employed as the objective functions to be optimized. Experimental results are validated by different metrics, namely the peak signal to noise ratio (PSNR), mean square error, feature similarity index and CPU running time for all the test cases. The experimental results established that the Kapur's entropy segmentation method based on the modified CS required the least computational time compared to Otsu's between-class variance segmentation method and the Tsallis entropy segmentation method. Nevertheless, Tsallis entropy method with optimized multi-threshold levels achieved superior performance compared to the other two segmentation methods in terms of the PSNR.

摘要

微观图像分析是一项具有挑战性的任务,因为存在弱相关性以及可能导致歧义的不同感兴趣区域。它在技术和医学的前沿领域也很有价值。细胞的识别和计数在精确诊断特定疾病的特征提取中起着至关重要的作用。为了在显微镜图像中识别和计数细胞,需要准确识别不同的区域。因此,在当前工作中,提出了一种结合标记细胞的细胞分割和识别新方法。因此,采用了一种基于预处理步骤后的布谷鸟搜索的新方法。该方法是在用作脑细胞样本的大鼠海马体的光学显微镜图像上开发和评估的。所提出的方法可以直接应用于彩色图像。所提出的方法在布谷鸟搜索(CS)算法中结合了McCulloch方法来生成 Lévy 飞行。几种目标函数,即大津法、卡普尔熵和 Tsallis 熵用于分割。在布谷鸟搜索过程中,采用大津类间方差、卡普尔熵和 Tsallis 熵作为要优化的目标函数。通过不同的指标对实验结果进行验证,即所有测试用例的峰值信噪比(PSNR)、均方误差、特征相似性指数和 CPU 运行时间。实验结果表明,与大津类间方差分割方法和 Tsallis 熵分割方法相比,基于改进 CS 的卡普尔熵分割方法所需的计算时间最少。然而,在 PSNR 方面,具有优化多阈值水平的 Tsallis 熵方法与其他两种分割方法相比具有更好的性能。

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