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一种通过高通量抑制剂筛选鉴定调控胚胎干细胞多能性激酶的简单方法。

A Simple Method to Identify Kinases That Regulate Embryonic Stem Cell Pluripotency by High-throughput Inhibitor Screening.

作者信息

Williams Charles A C, Gray Nathanael S, Findlay Greg M

机构信息

The MRC Protein Phosphorylation and Ubiquitylation Unit, School of Life Sciences, University of Dundee.

Department of Cancer Biology, Dana-Farber Cancer Institute; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School.

出版信息

J Vis Exp. 2017 May 12(123):55515. doi: 10.3791/55515.

DOI:10.3791/55515
PMID:28570543
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5607952/
Abstract

Embryonic stem cells (ESCs) can self-renew or differentiate into all cell types, a phenomenon known as pluripotency. Distinct pluripotent states have been described, termed "naïve" and "primed" pluripotency. The mechanisms that control naïve-primed transition are poorly understood. In particular, we remain poorly informed about protein kinases that specify naïve and primed pluripotent states, despite increasing availability of high-quality tool compounds to probe kinase function. Here, we describe a scalable platform to perform targeted small molecule screens for kinase regulators of the naïve-primed pluripotent transition in mouse ESCs. This approach utilizes simple cell culture conditions and standard reagents, materials and equipment to uncover and validate kinase inhibitors with hitherto unappreciated effects on pluripotency. We discuss potential applications for this technology, including screening of other small molecule collections such as increasingly sophisticated kinase inhibitors and emerging libraries of epigenetic tool compounds.

摘要

胚胎干细胞(ESCs)能够自我更新或分化为所有细胞类型,这一现象被称为多能性。已描述了不同的多能状态,即“原始态”和“启动态”多能性。控制原始态-启动态转变的机制尚不清楚。特别是,尽管用于探测激酶功能的高质量工具化合物越来越多,但我们对指定原始态和启动态多能状态的蛋白激酶仍然知之甚少。在此,我们描述了一个可扩展的平台,用于对小鼠胚胎干细胞中原始态-启动态多能转变的激酶调节剂进行靶向小分子筛选。这种方法利用简单的细胞培养条件以及标准试剂、材料和设备,来发现和验证对多能性有迄今未被认识到的影响的激酶抑制剂。我们讨论了该技术的潜在应用,包括筛选其他小分子集合,如日益复杂的激酶抑制剂和新兴的表观遗传工具化合物库。

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本文引用的文献

1
Erk5 Is a Key Regulator of Naive-Primed Transition and Embryonic Stem Cell Identity.Erk5是幼稚-启动转变和胚胎干细胞特性的关键调节因子。
Cell Rep. 2016 Aug 16;16(7):1820-8. doi: 10.1016/j.celrep.2016.07.033. Epub 2016 Aug 4.
2
Pharmacological Reprogramming of Fibroblasts into Neural Stem Cells by Signaling-Directed Transcriptional Activation.通过信号导向转录激活将成纤维细胞药理学重编程为神经干细胞
Cell Stem Cell. 2016 May 5;18(5):653-67. doi: 10.1016/j.stem.2016.03.020. Epub 2016 Apr 28.
3
Conversion of human fibroblasts into functional cardiomyocytes by small molecules.
小分子将人成纤维细胞转化为功能性心肌细胞。
Science. 2016 Jun 3;352(6290):1216-20. doi: 10.1126/science.aaf1502. Epub 2016 Apr 28.
4
Lineage-Specific Profiling Delineates the Emergence and Progression of Naive Pluripotency in Mammalian Embryogenesis.谱系特异性分析描绘了哺乳动物胚胎发生中幼稚多能性的出现和进展。
Dev Cell. 2015 Nov 9;35(3):366-82. doi: 10.1016/j.devcel.2015.10.011.
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Comprehensive characterization of the Published Kinase Inhibitor Set.全面表征已发表的激酶抑制剂集。
Nat Biotechnol. 2016 Jan;34(1):95-103. doi: 10.1038/nbt.3374. Epub 2015 Oct 26.
6
FGF signaling inhibition in ESCs drives rapid genome-wide demethylation to the epigenetic ground state of pluripotency.FGF 信号抑制可促使胚胎干细胞快速进行全基因组去甲基化,达到多能性的表观遗传基础状态。
Cell Stem Cell. 2013 Sep 5;13(3):351-9. doi: 10.1016/j.stem.2013.06.004. Epub 2013 Jul 11.
7
Interaction domains of Sos1/Grb2 are finely tuned for cooperative control of embryonic stem cell fate.Sos1/Grb2 的相互作用域经过精细调整,以实现对胚胎干细胞命运的协同控制。
Cell. 2013 Feb 28;152(5):1008-20. doi: 10.1016/j.cell.2013.01.056.
8
Esrrb is a direct Nanog target gene that can substitute for Nanog function in pluripotent cells.Esrrb 是 Nanog 的直接靶基因,可在多能细胞中替代 Nanog 的功能。
Cell Stem Cell. 2012 Oct 5;11(4):477-90. doi: 10.1016/j.stem.2012.08.002.
9
Naive and primed pluripotent states.未分化和预分化的多能状态。
Cell Stem Cell. 2009 Jun 5;4(6):487-92. doi: 10.1016/j.stem.2009.05.015.
10
Klf4 reverts developmentally programmed restriction of ground state pluripotency.Klf4逆转了发育程序设定的基态多能性限制。
Development. 2009 Apr;136(7):1063-9. doi: 10.1242/dev.030957. Epub 2009 Feb 18.