• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

产吩嗪内生菌SUK12的全基因组鸟枪法测序

Whole-genome shotgun sequence of phenazine-producing endophytic SUK12.

作者信息

Remali Juwairiah, Loke Kok-Keong, Ng Chyan Leong, Aizat Wan Mohd, Tiong John, Zin Noraziah Mohamad

机构信息

School of Bioscience and Biotechnology, Faculty of Science and Technology, University Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia.

Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia, 43600 Bangi, Selangor, Malaysia.

出版信息

Genom Data. 2017 May 24;13:7-10. doi: 10.1016/j.gdata.2017.05.015. eCollection 2017 Sep.

DOI:10.1016/j.gdata.2017.05.015
PMID:28580299
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5447654/
Abstract

sp. produces bioactive compounds with a broad spectrum of activities. SUK12 has been identified as a novel endophytic bacteria isolated from ethnomedicinal plant , and was found to produce the phenazine class of biologically active antimicrobial metabolites. The potential use of the phenazines has led to our research interest in determining the genome sequence of SUK12. This Whole Genome Shotgun project has been deposited at DDBJ/ENA/GenBank under the accession number PRJNA269542. The raw sequence data are available [https://www.ncbi.nlm.nih.gov/Traces/study/?acc=SRP105770].

摘要

sp.产生具有广泛活性的生物活性化合物。SUK12已被鉴定为从民族药用植物中分离出的一种新型内生细菌，并且发现它能产生具有生物活性的吩嗪类抗菌代谢物。吩嗪的潜在用途引发了我们测定SUK12基因组序列的研究兴趣。这个全基因组鸟枪法测序项目已保存在DDBJ/ENA/GenBank中，登录号为PRJNA269542。原始序列数据可在[https://www.ncbi.nlm.nih.gov/Traces/study/?acc=SRP105770]获取。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f435/5447654/1c7b66964968/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f435/5447654/1c7b66964968/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f435/5447654/1c7b66964968/gr1.jpg

相似文献

1
Whole-genome shotgun sequence of phenazine-producing endophytic SUK12.产吩嗪内生菌SUK12的全基因组鸟枪法测序
Genom Data. 2017 May 24;13:7-10. doi: 10.1016/j.gdata.2017.05.015. eCollection 2017 Sep.
2
Streptomyces kebangsaanensis sp. nov., an endophytic actinomycete isolated from an ethnomedicinal plant, which produces phenazine-1-carboxylic acid.新链霉菌 Kebangsaanensis 种，内生放线菌，从一种药用植物中分离出来，能产生吩嗪-1-羧酸。
Int J Syst Evol Microbiol. 2013 Oct;63(Pt 10):3733-3738. doi: 10.1099/ijs.0.047878-0. Epub 2013 May 3.
3
Genomic characterization of a new endophytic identifies biosynthetic pathway gene clusters for novel phenazine antibiotic production.一种新型内生菌的基因组特征鉴定出用于新型吩嗪抗生素生产的生物合成途径基因簇。
PeerJ. 2017 Nov 29;5:e3738. doi: 10.7717/peerj.3738. eCollection 2017.
4
Whole genome sequence data of strain B28A, isolated from Marine Water in India.从印度海水中分离出的B28A菌株的全基因组序列数据。
Data Brief. 2021 Jun 21;37:107240. doi: 10.1016/j.dib.2021.107240. eCollection 2021 Aug.
5
Dataset of de novo assembly and functional annotation of the transcriptomes of three native oleaginous microalgae from the Peruvian Amazon.来自秘鲁亚马逊地区的三种本地产油微藻转录组的从头组装和功能注释数据集。
Data Brief. 2020 Jun 21;31:105917. doi: 10.1016/j.dib.2020.105917. eCollection 2020 Aug.
6
Draft genome sequence data of strain GM, isolated from potato phyllosphere as a potential probiotic.从马铃薯叶际分离出的潜在益生菌GM菌株的基因组序列数据草案。
Data Brief. 2018 Nov 24;21:2504-2509. doi: 10.1016/j.dib.2018.11.107. eCollection 2018 Dec.
7
Draft genome sequence data of a tigecycline-resistant ST93 clinical strain isolated from bloodstream infection.从血流感染中分离出的一株耐替加环素ST93临床菌株的基因组序列数据草案。
Data Brief. 2018 Oct 5;21:414-418. doi: 10.1016/j.dib.2018.10.004. eCollection 2018 Dec.
8
Draft genome sequence of sp. KIM isolated from South African grassland biome soils.从南非草原生物群落土壤中分离出的[物种名称]KIM的基因组序列草图。 （这里原文“sp.”未明确写出具体物种名称，可根据实际情况补充完整准确的物种中文名）
Genom Data. 2017 Jun 10;13:24-26. doi: 10.1016/j.gdata.2017.06.002. eCollection 2017 Sep.
9
Data on genome sequencing, analysis and annotation of a pathogenic 062011msu.关于致病性062011msu的基因组测序、分析和注释的数据。
Data Brief. 2018 Jan 3;17:15-23. doi: 10.1016/j.dib.2017.12.054. eCollection 2018 Apr.
10
Draft genome sequence data and analysis of sp. strain EE-P12 isolated from a laboratory-scale anaerobic reactor.从实验室规模厌氧反应器中分离出的[具体物种名]菌株EE-P12的基因组序列数据草案及分析
Data Brief. 2018 Nov 26;21:2576-2580. doi: 10.1016/j.dib.2018.11.104. eCollection 2018 Dec.

本文引用的文献

1
The MaSuRCA genome assembler.马苏尔卡基因组组装器。
Bioinformatics. 2013 Nov 1;29(21):2669-77. doi: 10.1093/bioinformatics/btt476. Epub 2013 Aug 29.
2
Streptomyces kebangsaanensis sp. nov., an endophytic actinomycete isolated from an ethnomedicinal plant, which produces phenazine-1-carboxylic acid.新链霉菌 Kebangsaanensis 种，内生放线菌，从一种药用植物中分离出来，能产生吩嗪-1-羧酸。
Int J Syst Evol Microbiol. 2013 Oct;63(Pt 10):3733-3738. doi: 10.1099/ijs.0.047878-0. Epub 2013 May 3.
3
Antibiotics: a new hope.抗生素：新希望。
Chem Biol. 2012 Jan 27;19(1):3-10. doi: 10.1016/j.chembiol.2011.10.019.
4
Phenazine natural products: biosynthesis, synthetic analogues, and biological activity.吩嗪天然产物：生物合成、合成类似物及生物活性。
Chem Rev. 2004 Mar;104(3):1663-86. doi: 10.1021/cr020473j.
5
On a new antibiotic, griseolutein, produced by streptomyces.
Jpn Med J (Natl Inst Health Jpn). 1950 Apr;3(2):111-7. doi: 10.7883/yoken1948.3.111.
6
Endophenazines A-D, new phenazine antibiotics from the athropod associated endosymbiont Streptomyces anulatus II. Structure elucidation.内吩嗪A-D，来自与节肢动物相关的内共生菌环形链霉菌的新型吩嗪类抗生素。结构解析。
J Antibiot (Tokyo). 2002 Sep;55(9):801-6. doi: 10.7164/antibiotics.55.801.
7
Endophenazines A-D, new phenazine antibiotics from the arthropod associated endosymbiont Streptomyces anulatus. I. Taxonomy, fermentation, isolation and biological activities.内吩嗪A-D，来自与节肢动物相关的内共生菌环形链霉菌的新型吩嗪类抗生素。I. 分类学、发酵、分离及生物活性。
J Antibiot (Tokyo). 2002 Sep;55(9):794-800. doi: 10.7164/antibiotics.55.794.
8
Lomofungin, a new antibiotic produced by Streptomyces lomondensis sp. n.洛莫真菌素，一种由新种洛蒙德链霉菌产生的新型抗生素。
Appl Microbiol. 1969 May;17(5):755-9. doi: 10.1128/am.17.5.755-759.1969.