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电子生物成像中心(eBIC):英国生物电子显微镜国家研究设施。

Electron Bio-Imaging Centre (eBIC): the UK national research facility for biological electron microscopy.

机构信息

Diamond Light Source, Harwell Science and Innovation Campus, Didcot OX11 0DE, England.

Division of Structural Biology, Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, England.

出版信息

Acta Crystallogr D Struct Biol. 2017 Jun 1;73(Pt 6):488-495. doi: 10.1107/S2059798317007756. Epub 2017 May 31.

DOI:10.1107/S2059798317007756
PMID:28580910
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5458490/
Abstract

The recent resolution revolution in cryo-EM has led to a massive increase in demand for both time on high-end cryo-electron microscopes and access to cryo-electron microscopy expertise. In anticipation of this demand, eBIC was set up at Diamond Light Source in collaboration with Birkbeck College London and the University of Oxford, and funded by the Wellcome Trust, the UK Medical Research Council (MRC) and the Biotechnology and Biological Sciences Research Council (BBSRC) to provide access to high-end equipment through peer review. eBIC is currently in its start-up phase and began by offering time on a single FEI Titan Krios microscope equipped with the latest generation of direct electron detectors from two manufacturers. Here, the current status and modes of access for potential users of eBIC are outlined. In the first year of operation, 222 d of microscope time were delivered to external research groups, with 95 visits in total, of which 53 were from unique groups. The data collected have generated multiple high- to intermediate-resolution structures (2.8-8 Å), ten of which have been published. A second Krios microscope is now in operation, with two more due to come online in 2017. In the next phase of growth of eBIC, in addition to more microscope time, new data-collection strategies and sample-preparation techniques will be made available to external user groups. Finally, all raw data are archived, and a metadata catalogue and automated pipelines for data analysis are being developed.

摘要

近年来,冷冻电子显微镜技术的分辨率革命导致人们对高端冷冻电子显微镜的使用时间和冷冻电子显微镜专业知识的需求大幅增加。为了满足这一需求,eBIC 在英国钻石光源同步加速器与伦敦伯克贝克学院和牛津大学合作成立,并由惠康信托基金会、英国医学研究理事会(MRC)和生物技术与生物科学研究理事会(BBSRC)共同资助,通过同行评审为用户提供使用高端设备的机会。eBIC 目前正处于启动阶段,最初提供一台配备来自两家制造商的最新一代直接电子探测器的 FEI Titan Krios 显微镜的使用时间。这里概述了 eBIC 的潜在用户的当前状态和访问方式。在运营的第一年,向外部研究小组提供了 222 天的显微镜使用时间,共进行了 95 次访问,其中 53 次来自独特的研究小组。收集的数据已经产生了多个高到中等分辨率的结构(2.8-8 Å),其中 10 个已经发表。第二台 Krios 显微镜现已投入运行,还有两台将于 2017 年上线。在 eBIC 下一阶段的发展中,除了更多的显微镜使用时间外,还将向外部用户组提供新的数据收集策略和样品制备技术。最后,所有原始数据都被存档,并且正在开发元数据目录和用于数据分析的自动化管道。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e44/5458490/1d20a994ec06/d-73-00488-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e44/5458490/13965cd212e7/d-73-00488-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e44/5458490/7bd3cec4d4d9/d-73-00488-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e44/5458490/6738e75cfd13/d-73-00488-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e44/5458490/1d20a994ec06/d-73-00488-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e44/5458490/13965cd212e7/d-73-00488-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e44/5458490/7bd3cec4d4d9/d-73-00488-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e44/5458490/6738e75cfd13/d-73-00488-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e44/5458490/1d20a994ec06/d-73-00488-fig4.jpg

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