Lerch Thomas Z, Chenu Claire, Dignac Marie F, Barriuso Enrique, Mariotti André
UMR IEES-Paris, Institute of Ecology and Environmental Sciences of Paris, (Centre National de la Recherche Scientifique, UPMC, Institut National de la Recherche Agronomique, UPEC, IRD, Université Paris Diderot)Créteil, France.
UMR ECOSYS, Écologie Fonctionnelle et Écotoxicologie des Agroécosystèmes (Institut National de la Recherche Agronomique, AgroParisTech, Université Paris-Saclay)Thiverval-Grignon, France.
Front Microbiol. 2017 May 23;8:904. doi: 10.3389/fmicb.2017.00904. eCollection 2017.
The development of bacterial biofilms in natural environments may alter important functions, such as pollutant bioremediation by modifying both the degraders' physiology and/or interactions within the matrix. The present study focuses on the influence of biofilm formation on the metabolism of a pesticide, 2,4-dichlorophenoxyacetic acid (2,4-D), by JMP134. Pure cultures were established in a liquid medium with 2,4-D as a sole carbon source with or without sand grains for 10 days. Bacterial numbers and 2,4-D concentrations in solution were followed by spectrophotometry, the respiration rate by gas chromatography and the surface colonization by electron microscopy. In addition, isotopic techniques coupled with Fatty Acid Methyl Ester (FAME) profiling were used to determine possible metabolic changes. After only 3 days, approximately 80% of the cells were attached to the sand grains and microscopy images showed that the porous medium was totally clogged by the development of a biofilm. After 10 days, there was 25% less 2,4-D in the solution in samples with sand than in control samples. This difference was due to (1) a higher (+8%) mineralization of 2,4-D by sessile bacteria and (2) a retention (15%) of 2,4-D in the biofilm matrix. Besides, the amount of carbohydrates, presumably constituting the biofilm polysaccharides, increased by 63%. Compound-specific isotope analysis revealed that the FAME isotopic signature was less affected by the biofilm lifestyle than was the FAME composition. These results suggest that sessile bacteria differ more in their anabolism than in their catabolism compared to their planktonic counterparts. This study stresses the importance of considering interactions between microorganisms and their habitat when studying pollutant dynamics in porous media.
在自然环境中,细菌生物膜的形成可能会改变重要功能,例如通过改变降解菌的生理机能和/或基质内的相互作用来进行污染物生物修复。本研究聚焦于生物膜形成对农药2,4-二氯苯氧乙酸(2,4-D)被JMP134代谢的影响。在以2,4-D作为唯一碳源的液体培养基中,分别在有或没有沙粒的情况下建立纯培养物,培养10天。通过分光光度法跟踪溶液中的细菌数量和2,4-D浓度,通过气相色谱法测定呼吸速率,通过电子显微镜观察表面定殖情况。此外,结合脂肪酸甲酯(FAME)谱分析的同位素技术被用于确定可能的代谢变化。仅3天后,约80%的细胞附着在沙粒上,显微镜图像显示多孔介质因生物膜的形成而完全堵塞。10天后,含沙样品溶液中的2,4-D比对照样品少25%。这种差异归因于:(1)固着细菌对2,4-D的矿化作用更高(+8%);(2)生物膜基质中2,4-D的滞留量(15%)。此外,可能构成生物膜多糖的碳水化合物量增加了63%。化合物特异性同位素分析表明,与FAME组成相比,生物膜生活方式对FAME同位素特征的影响较小。这些结果表明,与浮游细菌相比,固着细菌在合成代谢方面的差异比在分解代谢方面的差异更大。本研究强调了在研究多孔介质中的污染物动态时考虑微生物与其栖息地之间相互作用的重要性。