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噬菌蛭弧菌对细胞外营养物质的攻击阶段反应类似于在晚期周质内生长过程中观察到的反应。

Attack-Phase Bdellovibrio bacteriovorus Responses to Extracellular Nutrients Are Analogous to Those Seen During Late Intraperiplasmic Growth.

机构信息

School of Life Sciences, Ulsan National Institute of Science and Technology, 50 UNIST-gil, Ulsan, 689-798, Republic of Korea.

Nucleic Acid Chemistry and Engineering Unit, Okinawa Institute of Science and Technology (OIST), 1919-1 Tancha, Onna-son, Okinawa, 904-0495, Japan.

出版信息

Microb Ecol. 2017 Nov;74(4):937-946. doi: 10.1007/s00248-017-1003-1. Epub 2017 Jun 10.

Abstract

Bdellovibrio bacteriovorus is a predatory bacterium which lives by invading the periplasm of gram-negative bacteria and consuming them from within. This predator was thought to be dependent upon prey for nutrients since it lacks genes encoding for critical enzymes involved in amino acid biosynthesis. This study, however, found that planktonic attack-phase predators are not just dependent upon prey for nutrients, but rather, they respond to nutrients in the surrounding medium and, subsequently, synthesize and secrete proteases in a nutrient-dependent manner. The major secreted proteases were identified through mass spectrometry analyses. Subsequent RT-qPCR analyses found that the nutrient-induced proteases are similar to those expressed within the prey periplasm during the late intraperiplasmic growth phase. Furthermore, RNA sequencing found that incubating the planktonic attack-phase cells in a nutritious environment for a short period of time (4 h) changes its gene expression pattern to a status that is akin to the late intraperiplasmic phase, with more than 94% of the genes previously identified as being late intraperiplasmic-specific also being induced by nutrient broth in this study. This strong correlation between the gene expression patterns hints that the availability of hydrolyzed prey cell components to the predator is likely the stimulus controlling the expression of late intraperiplasmic B. bacteriovorus genes during predation.

摘要

蛭弧菌是一种捕食性细菌,通过入侵革兰氏阴性菌的周质并从内部消耗它们而生存。由于缺乏参与氨基酸生物合成的关键酶的基因,这种捕食者被认为依赖于猎物获取营养。然而,本研究发现,浮游攻击期捕食者不仅依赖猎物获取营养,而且还能响应周围介质中的营养物质,并随后以营养依赖的方式合成和分泌蛋白酶。通过质谱分析鉴定了主要分泌的蛋白酶。随后的 RT-qPCR 分析发现,营养诱导的蛋白酶与猎物周质内晚期周质内生长阶段表达的蛋白酶相似。此外,RNA 测序发现,将浮游攻击期细胞在营养丰富的环境中孵育很短的时间(4 小时),会使其基因表达模式发生变化,类似于晚期周质内阶段,超过 94%的先前被鉴定为晚期周质特异性的基因也被本研究中的营养肉汤诱导。这种基因表达模式之间的强烈相关性表明,被捕食者水解的猎物细胞成分的可用性很可能是控制捕食期间晚期周质 B. bacteriovorus 基因表达的刺激因素。

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