Grenga Lucia, Little Richard H, Malone Jacob G
John Innes Centre, Norwich Research Park, Colney Lane, Norwich NR4 7UH, UK.
University of East Anglia, Norwich Research Park, Norwich, NR4 7TJ, UK.
FEMS Microbiol Lett. 2017 Aug 1;364(14). doi: 10.1093/femsle/fnx125.
Pseudomonas species have evolved dynamic and intricate regulatory networks to fine-tune gene expression, with complex regulation occurring at every stage in the processing of genetic information. This approach enables Pseudomonas to generate precise individual responses to the environment in order to improve their fitness and resource economy. The weak correlations we observe between RNA and protein abundance highlight the significant regulatory contribution of a series of intersecting post-transcriptional pathways, influencing mRNA stability, translational activity and ribosome function, to Pseudomonas environmental responses. This review examines our current understanding of three major post-transcriptional regulatory systems in Pseudomonas spp.; Gac/Rsm, Hfq and RimK, and presents an overview of new research frontiers, emerging genome-wide methodologies, and their potential for the study of global regulatory responses in Pseudomonas.
假单胞菌属已经进化出动态且复杂的调控网络来微调基因表达,在遗传信息处理的每个阶段都发生复杂的调控。这种方式使假单胞菌能够对环境产生精确的个体反应,以提高其适应性和资源利用效率。我们观察到的RNA与蛋白质丰度之间的弱相关性凸显了一系列相互交叉的转录后途径对假单胞菌环境反应的重要调控作用,这些途径影响mRNA稳定性、翻译活性和核糖体功能。本综述探讨了我们目前对假单胞菌属中三种主要转录后调控系统的理解;Gac/Rsm、Hfq和RimK,并概述了新的研究前沿、新兴的全基因组方法及其在假单胞菌全球调控反应研究中的潜力。