Patel Meha P, Hu Liya, Stojanoski Vlatko, Sankaran Banumathi, Prasad B V Venkataram, Palzkill Timothy
Department of Molecular Biophysics and Integrated Bioimaging, Berkeley Center for Structural Biology, Lawrence Berkeley National Laboratory , Berkeley, California 94720, United States.
Biochemistry. 2017 Jul 11;56(27):3443-3453. doi: 10.1021/acs.biochem.7b00176. Epub 2017 Jun 27.
CTX-M β-lactamases provide resistance against the β-lactam antibiotic, cefotaxime, but not a related antibiotic, ceftazidime. β-Lactamases that carry the P167S substitution, however, provide ceftazidime resistance. In this study, CTX-M-14 was used as a model to study the structural changes caused by the P167S mutation that accelerate ceftazidime turnover. X-ray crystallography was used to determine the structures of the P167S apoenzyme along with the structures of the S70G/P167S, E166A/P167S, and E166A mutant enzymes complexed with ceftazidime as well as the E166A/P167S apoenzyme. The S70G and E166A mutations allow capture of the enzyme-substrate complex and the acylated form of ceftazidime, respectively. The results showed a large conformational change in the Ω-loop of the ceftazidime acyl-enzyme complex of the P167S mutant but not in the enzyme-substrate complex, suggesting the change occurs upon acylation. The change results in a larger active site that prevents steric clash between the aminothiazole ring of ceftazidime and the Asn170 residue in the Ω-loop, allowing accommodation of ceftazidime for hydrolysis. In addition, the conformational change was not observed in the E166A/P167S apoenzyme, suggesting the presence of acylated ceftazidime influences the conformational change. Finally, the E166A acyl-enzyme structure with ceftazidime did not exhibit the altered conformation, indicating the P167S substitution is required for the change. Taken together, the results reveal that the P167S substitution and the presence of acylated ceftazidime both drive the structure toward a conformational change in the Ω-loop and that in CTX-M P167S enzymes found in drug-resistant bacteria this will lead to an increased level of ceftazidime hydrolysis.
CTX-M β-内酰胺酶可使细菌对β-内酰胺类抗生素头孢噻肟产生耐药性,但对相关抗生素头孢他啶则无此作用。然而,携带P167S替代突变的β-内酰胺酶可使细菌对头孢他啶产生耐药性。在本研究中,CTX-M-14被用作模型,以研究由P167S突变引起的加速头孢他啶周转的结构变化。利用X射线晶体学确定了P167S脱辅基酶的结构,以及与头孢他啶复合的S70G/P167S、E166A/P167S和E166A突变酶的结构,还有E166A/P167S脱辅基酶的结构。S70G和E166A突变分别使酶-底物复合物和头孢他啶的酰化形式得以捕获。结果显示,P167S突变体的头孢他啶酰化酶复合物的Ω环发生了较大的构象变化,但酶-底物复合物中未出现这种变化,这表明该变化发生在酰化过程中。这种变化导致活性位点变大,从而防止头孢他啶的氨基噻唑环与Ω环中的Asn170残基之间发生空间冲突,使头孢他啶能够被容纳进行水解。此外,在E166A/P167S脱辅基酶中未观察到构象变化,这表明酰化头孢他啶的存在会影响构象变化。最后,与头孢他啶形成的E166A酰化酶结构未呈现出改变的构象,这表明该变化需要P167S替代突变。综上所述,结果表明P167S替代突变和酰化头孢他啶的存在均促使结构朝着Ω环的构象变化发展,并且在耐药细菌中发现的CTX-M P167S酶中,这将导致头孢他啶水解水平升高。