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一种用于球体依赖性生物制造过程中基本细胞过程和氧合作用的启发式计算模型。

A heuristic computational model of basic cellular processes and oxygenation during spheroid-dependent biofabrication.

作者信息

Sego T J, Kasacheuski U, Hauersperger D, Tovar A, Moldovan N I

机构信息

Department of Mechanical Engineering, Indiana University-Purdue University at Indianapolis, IN, United States of America.

出版信息

Biofabrication. 2017 Jun 15;9(2):024104. doi: 10.1088/1758-5090/aa6ed4.

Abstract

An emerging approach in biofabrication is the creation of 3D tissue constructs through scaffold-free, cell spheroid-only methods. The basic mechanism in this technology is spheroid fusion, which is driven by the minimization of energy, the same biophysical mechanism that governs spheroid formation. However, other factors such as oxygen and metabolite accessibility within spheroids impact on spheroid properties and their ability to form larger-scale structures. The goal of our work is to develop a simulation platform eventually capable of predicting the conditions that minimize metabolism-related cell loss within spheroids. To describe the behavior and dynamic properties of the cells in response to their neighbors and to transient nutrient concentration fields, we developed a hybrid discrete-continuous heuristic model, combining a cellular Potts-type approach with field equations applied to a randomly populated spheroid cross-section of prescribed cell-type constituency. This model allows for the description of: (i) cellular adhesiveness and motility; (ii) interactions with concentration fields, including diffusivity and oxygen consumption; and (iii) concentration-dependent, stochastic cell dynamics, driven by metabolite-dependent cell death. Our model readily captured the basic steps of spheroid-based biofabrication (as specifically dedicated to scaffold-free bioprinting), including intra-spheroid cell sorting (both in 2D and 3D implementations), spheroid defect closure, and inter-spheroid fusion. Moreover, we found that when hypoxia occurring at the core of the spheroid was set to trigger cell death, this was amplified upon spheroid fusion, but could be mitigated by external oxygen supplementation. In conclusion, optimization and further development of scaffold-free bioprinting techniques could benefit from our computational model which is able to simultaneously account for both cellular dynamics and metabolism in constructs obtained by scaffold-free biofabrication.

摘要

生物制造领域一种新兴的方法是通过无支架、仅利用细胞球体的方法来创建三维组织构建体。该技术的基本机制是球体融合,其驱动力是能量的最小化,这与控制球体形成的生物物理机制相同。然而,诸如球体内部的氧气和代谢物可及性等其他因素会影响球体的特性及其形成更大规模结构的能力。我们工作的目标是最终开发一个模拟平台,能够预测使球体内部与代谢相关的细胞损失最小化的条件。为了描述细胞响应其相邻细胞和瞬态营养物浓度场的行为及动态特性,我们开发了一种混合离散 - 连续启发式模型,将细胞Potts型方法与应用于具有规定细胞类型组成的随机填充球体横截面的场方程相结合。该模型能够描述:(i)细胞黏附性和运动性;(ii)与浓度场的相互作用,包括扩散率和氧气消耗;以及(iii)由代谢物依赖性细胞死亡驱动的浓度依赖性随机细胞动态。我们的模型很容易捕捉到基于球体的生物制造的基本步骤(特别适用于无支架生物打印),包括球体内细胞分选(二维和三维实现方式)、球体缺陷闭合以及球体间融合。此外,我们发现当设定球体核心处发生的缺氧触发细胞死亡时,这种情况在球体融合时会加剧,但可以通过外部补充氧气来缓解。总之,无支架生物打印技术的优化和进一步发展可以受益于我们的计算模型,该模型能够同时考虑无支架生物制造获得的构建体中的细胞动态和代谢。

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