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将1928年格雷和桑顿命名的皮氏假单胞菌(Pseudomonas pictorum)转移至嗜麦芽窄食单胞菌属,命名为嗜麦芽窄食单胞菌(Stenotrophomonas pictorum)新组合,并对嗜麦芽窄食单胞菌属的描述进行修订。

Transfer of Pseudomonas pictorum Gray and Thornton 1928 to genus Stenotrophomonas as Stenotrophomonas pictorum comb. nov., and emended description of the genus Stenotrophomonas.

作者信息

Ouattara Aboubakar Sidiki, Le Mer Jean, Joseph Manon, Macarie Hervé

机构信息

Laboratoire de Microbiologie et de Biotechnologie Microbienne, Ecole Doctorale Sciences et Technologies, Université Ouaga 1 Pr Joseph KI ZERBO, 03 BP 7021, Ouagadougou 03, Burkina Faso.

Aix Marseille Univ, Univ Toulon, CNRS, IRD, MIO, Marseille, France.

出版信息

Int J Syst Evol Microbiol. 2017 Jun;67(6):1894-1900. doi: 10.1099/ijsem.0.001880. Epub 2017 Jun 20.

Abstract

A polyphasic taxonomic approach including analysis of phenotypic, physiological and genotypic characteristics, 16S rRNA gene sequence and DNA-DNA hybridization analysis was used to determine the most consistent affiliation of Pseudomonas pictorum. Pseudomonas pictorum ATCC 23328T exhibited phenotypic traits of members of the genus Stenotrophomonas including cellular fatty acid composition, quinone and limited range of substrates that could be used. Antibiotic susceptibility and physiological characteristics were determined. The DNA G+C content was 65.7 mol%. Phylogenetic analysis revealed that the type strains of Stenotrophomonas terrae, Stenotrophomonashumi, Stenotrophomonasnitritireducens and Stenotrophomonasacidaminiphila were the nearest relatives (16S rRNA gene sequence similarity of 98.0 to 98.8 %). All the other type strains of species of the genus Stenotrophomonas showed high 16S rRNA gene sequence similarities (96.8 to 97.2 %). DNA-DNA hybridizations revealed 31.0, 32.0, 43.3 and 43.6 % reassociation between Pseudomonas pictorum ATCC 23328T and the type strains of S. terrae, S. humi, S. nitritireducens and S. acidaminiphila, respectively. Our overall results indicate that Pseudomonas pictorum should be transferred to the genus Stenotrophomonas as a novel species of this genus, Stenotrophomonas pictorum comb. nov. Since the original description of the genus Stenotrophomonaswas made with only one species (Stenotrophomonasmaltophilia), an emendation of the genus description is proposed in order to match better with the characteristics of the eleven novel species assigned to this genus since then.

摘要

采用多相分类方法,包括对表型、生理和基因型特征的分析、16S rRNA基因序列分析以及DNA-DNA杂交分析,以确定皮氏假单胞菌(Pseudomonas pictorum)最一致的分类归属。皮氏假单胞菌ATCC 23328T表现出嗜麦芽窄食单胞菌属成员的表型特征,包括细胞脂肪酸组成、醌类以及可利用的底物范围有限。测定了抗生素敏感性和生理特征。DNA的G+C含量为65.7 mol%。系统发育分析表明,嗜麦芽窄食单胞菌属(Stenotrophomonas)的土生嗜麦芽窄食单胞菌(Stenotrophomonas terrae)、胡氏嗜麦芽窄食单胞菌(Stenotrophomonas humi)、亚硝酸盐还原嗜麦芽窄食单胞菌(Stenotrophomonas nitritireducens)和嗜酸嗜麦芽窄食单胞菌(Stenotrophomonas acidaminiphila)的模式菌株是其最亲近的亲缘关系菌(16S rRNA基因序列相似性为98.0%至98.8%)。嗜麦芽窄食单胞菌属的所有其他模式菌株均显示出较高的16S rRNA基因序列相似性(96.8%至97.2%)。DNA-DNA杂交显示,皮氏假单胞菌ATCC 23328T与土生嗜麦芽窄食单胞菌、胡氏嗜麦芽窄食单胞菌、亚硝酸盐还原嗜麦芽窄食单胞菌和嗜酸嗜麦芽窄食单胞菌的模式菌株之间的重结合率分别为31.0%、32.0%、43.3%和43.6%。我们的总体结果表明,皮氏假单胞菌应转移至嗜麦芽窄食单胞菌属,作为该属的一个新物种,即嗜麦芽窄食单胞菌(Stenotrophomonas pictorum comb. nov.)。由于嗜麦芽窄食单胞菌属最初的描述仅涉及一个物种(嗜麦芽窄食单胞菌,Stenotrophomonas maltophilia),因此建议对该属的描述进行修订,以便更好地与自那时以来归入该属的11个新物种的特征相匹配。

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