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氧化态依赖的钼含甲酸脱氢酶活性位点的结合特性。

Oxidation-State-Dependent Binding Properties of the Active Site in a Mo-Containing Formate Dehydrogenase.

机构信息

Department of Chemistry, University of Cambridge , Lensfield Road, Cambridge CB2 1EW, U.K.

Medical Research Council Mitochondrial Biology Unit, University of Cambridge , Wellcome Trust/MRC Building, Cambridge Biomedical Campus, Hills Road, Cambridge CB2 0XY, U.K.

出版信息

J Am Chem Soc. 2017 Jul 26;139(29):9927-9936. doi: 10.1021/jacs.7b03958. Epub 2017 Jul 17.

Abstract

Molybdenum-containing formate dehydrogenase H from Escherichia coli (EcFDH-H) is a powerful model system for studies of the reversible reduction of CO to formate. However, the mechanism of FDH catalysis is currently under debate, and whether the primary Mo coordination sphere remains saturated or one of the ligands dissociates to allow direct substrate binding during turnover is disputed. Herein, we describe how oxidation-state-dependent changes at the active site alter its inhibitor binding properties. Using protein film electrochemistry, we show that formate oxidation by EcFDH-H is inhibited strongly and competitively by N, OCN, SCN, NO, and NO, whereas CO reduction is inhibited only weakly and not competitively. During catalysis, the Mo center cycles between the formal Mo(VI)═S and Mo(IV)-SH states, and by modeling chronoamperometry data recorded at different potentials and substrate and inhibitor concentrations, we demonstrate that both formate oxidation and CO reduction are inhibited by selective inhibitor binding to the Mo(VI)═S state. The strong dependence of inhibitor-binding affinity on both Mo oxidation state and inhibitor electron-donor strength indicates that inhibitors (and substrates) bind directly to the Mo center. We propose that inhibitors bind to the Mo following dissociation of a selenocysteine ligand to create a vacant coordination site for catalysis and close by considering the implications of our data for the mechanisms of formate oxidation and CO reduction.

摘要

大肠杆菌中含钼甲酸盐脱氢酶 H(EcFDH-H)是研究 CO 可逆还原为甲酸盐的有力模型体系。然而,FDH 催化的机制目前存在争议,在周转过程中,配体是否脱离一个以允许直接结合底物,从而使主钼配位球饱和或部分配体脱离仍有争议。在此,我们描述了活性部位的氧化态依赖性变化如何改变其抑制剂结合特性。我们使用蛋白膜电化学技术表明,EcFDH-H 催化的甲酸盐氧化受 N、OCN、SCN、NO 和 NO 强烈且竞争抑制,而 CO 还原仅受弱抑制且无竞争抑制。在催化过程中,钼中心在形式 Mo(VI)═S 和 Mo(IV)-SH 态之间循环,通过对不同电位和底物及抑制剂浓度下记录的计时安培数据进行建模,我们证明了甲酸盐氧化和 CO 还原都受到选择性抑制剂与 Mo(VI)═S 态结合的抑制。抑制剂结合亲和力对钼氧化态和抑制剂给电子强度的强烈依赖性表明,抑制剂(和底物)直接与钼中心结合。我们提出,抑制剂在硒代半胱氨酸配体脱离以创建催化的空配位位点后与钼结合,并考虑了我们的数据对甲酸盐氧化和 CO 还原机制的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0048/5532686/9b0375b761e5/ja-2017-03958a_0001.jpg

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