Sørensen Mikkel Lindstrøm, Dahl Peter, Sams Thomas
Biomedical Engineering, Dept. of Electrical Engineering, Technical University of Denmark, DK-2800 Lyngby, Denmark.
Dept. of Applied Mathematics and Computer Science, Technical University of Denmark, DK-2800 Lyngby, Denmark.
PLoS One. 2017 Jun 23;12(6):e0180199. doi: 10.1371/journal.pone.0180199. eCollection 2017.
Bacteria in a biofilm colony have the capacity to monitor the size and growth conditions for the colony and modify their phenotypical behaviour to optimise attacks, defence, migration, etc. The quorum sensing systems controlling this involve production and sensing of diffusive signal molecules. Frequently, quorum sensing systems carry a positive feedback loop which produces a switch at a threshold size of the colony. This all-or-none switch can be beneficial to create a sudden attack, leaving a host little time to establish a defence. The reaction-diffusion system describing a basal quorum sensing loop involves production of signal molecules, diffusion of signal molecules, and detection of signal molecules. We study the ignition process in a numerical solution for a basal quorum sensor and demonstrate that even in a large colony the ignition travels through the whole colony in a less than a minute. The ignition of the positive feedback loop was examined in different approximations. As expected, in the exact calculation the ignition was found to be delayed compared to a calculation where the binding of signal molecules was quasistatic. The buffering of signal molecules is found to have little effect on the ignition process. Contrary to expectation, we find that the ignition does not start when the threshold is reached at the center-instead it allows for the threshold to be approached in the whole colony followed by an almost simultaneous ignition of the whole biofilm aggregate.
生物膜群落中的细菌有能力监测群落的大小和生长条件,并改变其表型行为以优化攻击、防御、迁移等。控制这一过程的群体感应系统涉及扩散信号分子的产生和感应。群体感应系统通常带有一个正反馈回路,该回路在群落达到阈值大小时产生一个开关。这种全或无的开关有助于发动突然攻击,使宿主几乎没有时间建立防御。描述基本群体感应回路的反应扩散系统涉及信号分子的产生、信号分子的扩散以及信号分子的检测。我们在基本群体感应传感器的数值解中研究点火过程,并证明即使在大型群落中,点火也能在不到一分钟的时间内传遍整个群落。在不同的近似情况下研究了正反馈回路的点火情况。正如预期的那样,在精确计算中,与信号分子结合为准静态的计算相比,点火被发现有所延迟。发现信号分子的缓冲对点火过程影响很小。与预期相反,我们发现点火不是在中心达到阈值时开始,而是在整个群落中接近阈值,随后整个生物膜聚集体几乎同时点火。