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利用深度学习从田间图像自动识别感染北方叶斑病的玉米植株

Automated Identification of Northern Leaf Blight-Infected Maize Plants from Field Imagery Using Deep Learning.

作者信息

DeChant Chad, Wiesner-Hanks Tyr, Chen Siyuan, Stewart Ethan L, Yosinski Jason, Gore Michael A, Nelson Rebecca J, Lipson Hod

机构信息

First author: Department of Computer Science, Columbia University in the City of New York, 10027; second, fourth, and sixth authors: Plant Breeding and Genetics Section, School of Integrative Plant Science, Cornell University, Ithaca, NY 14853; third author: Department of Mechanical Engineering, Columbia University; fifth author: Uber AI Labs, San Francisco 94103; seventh author: Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University; and eighth author: Department of Mechanical Engineering and Institute of Data Science, Columbia University.

出版信息

Phytopathology. 2017 Nov;107(11):1426-1432. doi: 10.1094/PHYTO-11-16-0417-R. Epub 2017 Aug 24.

Abstract

Northern leaf blight (NLB) can cause severe yield loss in maize; however, scouting large areas to accurately diagnose the disease is time consuming and difficult. We demonstrate a system capable of automatically identifying NLB lesions in field-acquired images of maize plants with high reliability. This approach uses a computational pipeline of convolutional neural networks (CNNs) that addresses the challenges of limited data and the myriad irregularities that appear in images of field-grown plants. Several CNNs were trained to classify small regions of images as containing NLB lesions or not; their predictions were combined into separate heat maps, then fed into a final CNN trained to classify the entire image as containing diseased plants or not. The system achieved 96.7% accuracy on test set images not used in training. We suggest that such systems mounted on aerial- or ground-based vehicles can help in automated high-throughput plant phenotyping, precision breeding for disease resistance, and reduced pesticide use through targeted application across a variety of plant and disease categories.

摘要

玉米大斑病(NLB)会导致玉米严重减产;然而,在大面积区域进行巡查以准确诊断该病害既耗时又困难。我们展示了一种能够在从田间获取的玉米植株图像中自动且高度可靠地识别大斑病病斑的系统。这种方法使用了一个卷积神经网络(CNN)计算流程,该流程解决了数据有限以及田间种植作物图像中出现的大量不规则情况等挑战。训练了几个CNN来将图像的小区域分类为是否包含大斑病病斑;它们的预测结果被合并到单独的热图中,然后输入到一个最终的CNN中进行训练,以将整个图像分类为是否包含患病植株。该系统在未用于训练的测试集图像上达到了96.7%的准确率。我们认为,安装在飞行器或地面车辆上的此类系统有助于实现自动化高通量植物表型分析、抗病性精准育种,并通过针对各种植物和病害类别进行精准施药来减少农药使用。

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