Prabhakar Arjun, Capece Mark C, Petrov Alexey, Choi Junhong, Puglisi Joseph D
Department of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305, USA; Program in Biophysics, Stanford University, Stanford, CA 94305, USA.
Department of Structural Biology, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Chemistry, Stanford University, Stanford, CA 94305, USA.
Cell Rep. 2017 Jul 5;20(1):161-172. doi: 10.1016/j.celrep.2017.06.028.
During termination of translation, the nascent peptide is first released from the ribosome, which must be subsequently disassembled into subunits in a process known as ribosome recycling. In bacteria, termination and recycling are mediated by the translation factors RF, RRF, EF-G, and IF3, but their precise roles have remained unclear. Here, we use single-molecule fluorescence to track the conformation and composition of the ribosome in real time during termination and recycling. Our results show that peptide release by RF induces a rotated ribosomal conformation. RRF binds to this rotated intermediate to form the substrate for EF-G that, in turn, catalyzes GTP-dependent subunit disassembly. After the 50S subunit departs, IF3 releases the deacylated tRNA from the 30S subunit, thus preventing reassembly of the 70S ribosome. Our findings reveal the post-termination rotated state as the crucial intermediate in the transition from termination to recycling.
在翻译终止过程中,新生肽首先从核糖体上释放出来,随后核糖体必须在一个称为核糖体循环的过程中被拆解成亚基。在细菌中,终止和循环由翻译因子RF、RRF、EF-G和IF3介导,但其确切作用仍不清楚。在这里,我们使用单分子荧光实时跟踪终止和循环过程中核糖体的构象和组成。我们的结果表明,RF介导的肽释放会诱导核糖体构象旋转。RRF与这种旋转中间体结合,形成EF-G的底物,进而催化GTP依赖性亚基的拆解。50S亚基离开后,IF3从30S亚基上释放脱酰基tRNA,从而防止70S核糖体重新组装。我们的研究结果揭示了终止后旋转状态是从终止到循环转变过程中的关键中间体。