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一个用于研究年龄依赖性蛋白质丰度和定位变化的简单微流控平台。

A simple microfluidic platform to study age-dependent protein abundance and localization changes in .

作者信息

Cabrera Margarita, Novarina Daniele, Rempel Irina L, Veenhoff Liesbeth M, Chang Michael

机构信息

European Research Institute for the Biology of Ageing, University of Groningen, University Medical Center Groningen, 9713 AV Groningen, the Netherlands.

出版信息

Microb Cell. 2017 Apr 13;4(5):169-174. doi: 10.15698/mic2017.05.573.

Abstract

The budding yeast divides asymmetrically, with a smaller daughter cell emerging from its larger mother cell. While the daughter lineage is immortal, mother cells age with each cell division and have a finite lifespan. The replicative ageing of the yeast mother cell has been used as a model to study the ageing of mitotically active human cells. Several microfluidic platforms, which use fluid flow to selectively remove daughter cells, have recently been developed that can monitor cell physiology as mother cells age. However, these platforms are not trivial to set up and users often require many hours of training. In this study, we have developed a simple system, which combines a commercially available microfluidic platform (the CellASIC ONIX Microfluidic Platform) and a genetic tool to prevent the proliferation of daughter cells (the Mother Enrichment Program), to monitor protein abundance and localization changes during approximately the first half of the yeast replicative lifespan. We validated our system by observing known age-dependent changes, such as decreased Sir2 abundance, and have identified a protein with a previously unknown age-dependent change in localization.

摘要

出芽酵母进行不对称分裂,较小的子细胞从较大的母细胞中产生。虽然子细胞谱系是永生的,但母细胞会随着每次细胞分裂而衰老,并且具有有限的寿命。酵母母细胞的复制性衰老已被用作研究有丝分裂活跃的人类细胞衰老的模型。最近开发了几种微流控平台,这些平台利用流体流动选择性地去除子细胞,从而能够在母细胞衰老时监测细胞生理状态。然而,这些平台的搭建并不简单,用户通常需要接受数小时的培训。在本研究中,我们开发了一个简单的系统,该系统结合了市售的微流控平台(CellASIC ONIX微流控平台)和一种防止子细胞增殖的遗传工具(母细胞富集程序),以监测酵母复制寿命大约前半段期间蛋白质丰度和定位的变化。我们通过观察已知的年龄依赖性变化(如Sir2丰度降低)来验证我们的系统,并鉴定出一种在定位上具有先前未知的年龄依赖性变化的蛋白质。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0aea/5425278/1c9bff75ebd1/mic-04-169-g01.jpg

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