Singh Raghuveer, White Derrick, Blum Paul
E234 Beadle Center, School of Biological Sciences, University of Nebraska, Lincoln, Nebraska, USA.
E234 Beadle Center, School of Biological Sciences, University of Nebraska, Lincoln, Nebraska, USA
Appl Environ Microbiol. 2017 Aug 31;83(18). doi: 10.1128/AEM.00930-17. Print 2017 Sep 15.
is a hyperthermophilic anaerobic bacterium that produces molecular hydrogen (H) by fermentation. It catabolizes a broad range of carbohydrates through the action of diverse ABC transporters. However, in and related species, highly similar genes with ambiguous annotation obscure a precise understanding of genome function. In , three putative genes, all annotated as ATPase subunits, exhibited high identity to each other. To distinguish between these genes, disruption mutants were constructed by gene replacement, and the resulting mutant cell lines were characterized. Only a disruption of produced a defect in maltose catabolism. To verify that the mutant phenotype arose specifically from inactivation, the mutation was repaired by recombination, and maltose catabolism was restored. This study demonstrates the importance of a maltose ABC-type transporter and its relationship to sugar metabolism in The application and further development of a genetic system was used here to investigate gene paralogs in the hyperthermophile The occurrence of three ABC transporter ATPase subunits all annotated as was evaluated using a combination of genetic and bioinformatic approaches. The results clarify the role of only one gene in maltose catabolism in a nonmodel organism noted for fermentative hydrogen production.
是一种嗜热厌氧菌,通过发酵产生分子氢(H)。它通过多种ABC转运蛋白的作用分解代谢多种碳水化合物。然而,在[具体物种]及相关物种中,具有模糊注释的高度相似基因妨碍了对基因组功能的精确理解。在[具体物种]中,三个推定的[基因名称]基因,均注释为ATPase亚基,彼此间具有高度同一性。为区分这些基因,通过基因替换构建了[基因名称]破坏突变体,并对所得突变细胞系进行了表征。只有[基因名称]的破坏导致麦芽糖分解代谢出现缺陷。为验证突变表型是否 specifically 由[基因名称]失活引起,通过重组修复了[基因名称]突变,麦芽糖分解代谢得以恢复。本研究证明了麦芽糖ABC型转运蛋白在[具体物种]中的重要性及其与糖代谢的关系。这里使用遗传系统来研究嗜热菌[具体物种]中的基因旁系同源物,并对三个均注释为[基因名称] 的ABC转运蛋白ATPase亚基的出现情况进行了评估。结果阐明了在以发酵产氢而闻名的非模式生物中,只有一个[基因名称]基因在麦芽糖分解代谢中的作用。