• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

接近极限:生长受NAD(P)H/ATP生成通量比的限制

Close to the Edge: Growth Restrained by the NAD(P)H/ATP Formation Flux Ratio.

作者信息

van Niel Ed W J, Bergdahl Basti, Hahn-Hägerdal Bärbel

机构信息

Division of Applied Microbiology, Lund UniversityLund, Sweden.

出版信息

Front Microbiol. 2017 Jun 22;8:1149. doi: 10.3389/fmicb.2017.01149. eCollection 2017.

DOI:10.3389/fmicb.2017.01149
PMID:28690597
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5479917/
Abstract

Most fermentative microorganisms grow well-under anaerobic conditions managing a balanced redox and appropriate energy metabolism, but a few species do exist in which cells have to cope with inadequate energy recovery or capture and/or redox balancing. Two cases of these species, i.e., the metabolically engineered enabling it to ferment xylose and fermenting glucose via the phosphoketolase pathway, are here used to introduce a quantification parameter to capture what limits the growth rate of these microorganisms under anaerobic conditions. This dimensionless parameter, the cofactor formation flux ratio ( ), is the ratio between the redox formation flux (J), and the energy carrier formation flux (J), which are mainly connected to the central carbon pathways. Data from metabolic flux analyses performed in previous and present studies were used to estimate the -values. Even though both microorganisms possess different central pathways, a similar relationship between and the specific growth rate (μ) was found. Furthermore, for both microorganisms external electron acceptors moderately reduced the -value, thereby raising the μ accordingly. Based on the emerging profile of this relationship an interpretation is presented suggesting that this quantitative analysis can be applied beyond the two microbial species experimentally investigated in the current study to provide data for future targeted strain development strategies.

摘要

大多数发酵微生物在厌氧条件下生长良好,能够维持平衡的氧化还原状态和适当的能量代谢,但确实存在少数几种微生物,其细胞必须应对能量回收或捕获不足和/或氧化还原平衡问题。这里以两种这类微生物为例,即经过代谢工程改造使其能够发酵木糖以及通过磷酸酮醇酶途径发酵葡萄糖的微生物,来引入一个量化参数,以确定在厌氧条件下限制这些微生物生长速率的因素。这个无量纲参数,即辅因子形成通量比( ),是氧化还原形成通量(J)与能量载体形成通量(J)的比值,它们主要与中心碳途径相关。利用先前和当前研究中进行的代谢通量分析数据来估算 值。尽管这两种微生物具有不同的中心途径,但发现 与比生长速率(μ)之间存在相似的关系。此外,对于这两种微生物,外部电子受体适度降低了 值,从而相应提高了 μ。基于这种关系的新情况,本文提出一种解释,表明这种定量分析可应用于当前研究中实验研究的两种微生物之外,为未来有针对性的菌株开发策略提供数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c833/5479917/fac6db2950dc/fmicb-08-01149-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c833/5479917/7abc2c5363b8/fmicb-08-01149-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c833/5479917/fac6db2950dc/fmicb-08-01149-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c833/5479917/7abc2c5363b8/fmicb-08-01149-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c833/5479917/fac6db2950dc/fmicb-08-01149-g0002.jpg

相似文献

1
Close to the Edge: Growth Restrained by the NAD(P)H/ATP Formation Flux Ratio.接近极限:生长受NAD(P)H/ATP生成通量比的限制
Front Microbiol. 2017 Jun 22;8:1149. doi: 10.3389/fmicb.2017.01149. eCollection 2017.
2
Fermentation of mixed glucose-xylose substrates by engineered strains of Saccharomyces cerevisiae: role of the coenzyme specificity of xylose reductase, and effect of glucose on xylose utilization.酿酒酵母工程菌株对混合葡萄糖-木糖底物的发酵:木糖还原酶辅酶特异性的作用,以及葡萄糖对木糖利用的影响。
Microb Cell Fact. 2010 Mar 10;9:16. doi: 10.1186/1475-2859-9-16.
3
Impact of overexpressing NADH kinase on glucose and xylose metabolism in recombinant xylose-utilizing Saccharomyces cerevisiae.过表达NADH激酶对重组利用木糖的酿酒酵母中葡萄糖和木糖代谢的影响
Appl Microbiol Biotechnol. 2009 Apr;82(5):909-19. doi: 10.1007/s00253-009-1900-4. Epub 2009 Feb 17.
4
Exploring xylose metabolism in Spathaspora species: XYL1.2 from Spathaspora passalidarum as the key for efficient anaerobic xylose fermentation in metabolic engineered Saccharomyces cerevisiae.探索斯帕塔斯孢属物种中的木糖代谢:来自巴氏斯帕塔斯孢的XYL1.2是代谢工程改造的酿酒酵母中高效厌氧木糖发酵的关键。
Biotechnol Biofuels. 2016 Aug 5;9:167. doi: 10.1186/s13068-016-0570-6. eCollection 2016.
5
Characterization of the metabolic shift between oxidative and fermentative growth in Saccharomyces cerevisiae by comparative 13C flux analysis.通过比较13C通量分析对酿酒酵母氧化生长和发酵生长之间的代谢转变进行表征。
Microb Cell Fact. 2005 Nov 3;4:30. doi: 10.1186/1475-2859-4-30.
6
Anaerobic and aerobic batch cultivations of Saccharomyces cerevisiae mutants impaired in glycerol synthesis.对甘油合成受损的酿酒酵母突变体进行厌氧和好氧分批培养。
Yeast. 2000 Mar 30;16(5):463-74. doi: 10.1002/(SICI)1097-0061(20000330)16:5<463::AID-YEA535>3.0.CO;2-3.
7
Metabolic Impact of Redox Cofactor Perturbations on the Formation of Aroma Compounds in Saccharomyces cerevisiae.氧化还原辅因子扰动对酿酒酵母中香气化合物形成的代谢影响。
Appl Environ Microbiol. 2015 Oct 16;82(1):174-83. doi: 10.1128/AEM.02429-15. Print 2016 Jan 1.
8
The NADP(H) redox couple in yeast metabolism.酵母代谢中的烟酰胺腺嘌呤二核苷酸磷酸(还原型辅酶II)氧化还原对。
Antonie Van Leeuwenhoek. 1986;52(5):411-29. doi: 10.1007/BF00393469.
9
Determination of the cytosolic free NAD/NADH ratio in Saccharomyces cerevisiae under steady-state and highly dynamic conditions.在稳态和高动态条件下测定酿酒酵母胞质溶胶中的游离NAD/NADH比率。
Biotechnol Bioeng. 2008 Jul 1;100(4):734-43. doi: 10.1002/bit.21813.
10
Determination of the in vivo NAD:NADH ratio in Saccharomyces cerevisiae under anaerobic conditions, using alcohol dehydrogenase as sensor reaction.在厌氧条件下,以乙醇脱氢酶作为传感反应,测定酿酒酵母体内的NAD:NADH比率。
Yeast. 2015 Aug;32(8):541-57. doi: 10.1002/yea.3078. Epub 2015 Jul 14.

引用本文的文献

1
Evaluation of Pyrophosphate-Driven Proton Pumps in under Stress Conditions.应激条件下焦磷酸盐驱动质子泵的评估
Microorganisms. 2024 Mar 20;12(3):625. doi: 10.3390/microorganisms12030625.
2
Impact of the fermentation parameters pH and temperature on stress resilience of Lactobacillus reuteri DSM 17938.发酵参数pH值和温度对罗伊氏乳杆菌DSM 17938应激恢复能力的影响
AMB Express. 2019 May 17;9(1):66. doi: 10.1186/s13568-019-0789-2.

本文引用的文献

1
Xylose Fermentation by Saccharomyces cerevisiae: Challenges and Prospects.木糖在酿酒酵母中的发酵:挑战与展望。
Int J Mol Sci. 2016 Feb 25;17(3):207. doi: 10.3390/ijms17030207.
2
Proton Transport and pH Control in Fungi.真菌中的质子运输与pH调控
Adv Exp Med Biol. 2016;892:33-68. doi: 10.1007/978-3-319-25304-6_3.
3
Xylose fermentation as a challenge for commercialization of lignocellulosic fuels and chemicals.木糖发酵:木质纤维素燃料和化学品商业化面临的挑战
Biotechnol Lett. 2015 Apr;37(4):761-72. doi: 10.1007/s10529-014-1756-2. Epub 2014 Dec 19.
4
Glycolytic strategy as a tradeoff between energy yield and protein cost.糖酵解策略作为能量产生和蛋白质成本之间的权衡。
Proc Natl Acad Sci U S A. 2013 Jun 11;110(24):10039-44. doi: 10.1073/pnas.1215283110. Epub 2013 Apr 29.
5
Genome-wide analysis of intracellular pH reveals quantitative control of cell division rate by pH(c) in Saccharomyces cerevisiae.全基因组分析细胞内 pH 值揭示了 Saccharomyces cerevisiae 中 pH(c) 对细胞分裂率的定量控制。
Genome Biol. 2012 Sep 10;13(9):R80. doi: 10.1186/gb-2012-13-9-r80.
6
Spatial simulations in systems biology: from molecules to cells.系统生物学中的空间模拟:从分子到细胞
Int J Mol Sci. 2012;13(6):7798-7827. doi: 10.3390/ijms13067798. Epub 2012 Jun 21.
7
Dynamic metabolomics differentiates between carbon and energy starvation in recombinant Saccharomyces cerevisiae fermenting xylose.动态代谢组学可区分重组酿酒酵母发酵木糖过程中的碳饥饿和能量饥饿。
Biotechnol Biofuels. 2012 May 15;5(1):34. doi: 10.1186/1754-6834-5-34.
8
Cellular responses of Saccharomyces cerevisiae at near-zero growth rates: transcriptome analysis of anaerobic retentostat cultures.酿酒酵母在接近零生长速率下的细胞反应:厌氧恒化器培养的转录组分析。
FEMS Yeast Res. 2011 Dec;11(8):603-20. doi: 10.1111/j.1567-1364.2011.00750.x. Epub 2011 Sep 26.
9
The potential of biodetoxification activity as a probiotic property of Lactobacillus reuteri.鼠李糖乳杆菌生物解毒活性的潜力作为其益生菌特性。
Int J Food Microbiol. 2012 Jan 16;152(3):206-10. doi: 10.1016/j.ijfoodmicro.2011.10.007. Epub 2011 Oct 20.
10
Molecular aspects of bacterial pH sensing and homeostasis.细菌 pH 感应和动态平衡的分子方面。
Nat Rev Microbiol. 2011 May;9(5):330-43. doi: 10.1038/nrmicro2549. Epub 2011 Apr 5.