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数字全息显微镜,一种用于检测土卫二和其他冰质星球羽流样本中微生物的方法。

Digital Holographic Microscopy, a Method for Detection of Microorganisms in Plume Samples from Enceladus and Other Icy Worlds.

作者信息

Bedrossian Manuel, Lindensmith Chris, Nadeau Jay L

机构信息

1 Graduate Aerospace Laboratories (GALCIT) and Medical Engineering, California Institute of Technology , Pasadena, California.

2 Jet Propulsion Laboratory, California Institute of Technology , Pasadena, California.

出版信息

Astrobiology. 2017 Sep;17(9):913-925. doi: 10.1089/ast.2016.1616. Epub 2017 Jul 14.

Abstract

Detection of extant microbial life on Earth and elsewhere in the Solar System requires the ability to identify and enumerate micrometer-scale, essentially featureless cells. On Earth, bacteria are usually enumerated by culture plating or epifluorescence microscopy. Culture plates require long incubation times and can only count culturable strains, and epifluorescence microscopy requires extensive staining and concentration of the sample and instrumentation that is not readily miniaturized for space. Digital holographic microscopy (DHM) represents an alternative technique with no moving parts and higher throughput than traditional microscopy, making it potentially useful in space for detection of extant microorganisms provided that sufficient numbers of cells can be collected. Because sample collection is expected to be the limiting factor for space missions, especially to outer planets, it is important to quantify the limits of detection of any proposed technique for extant life detection. Here we use both laboratory and field samples to measure the limits of detection of an off-axis digital holographic microscope (DHM). A statistical model is used to estimate any instrument's probability of detection at various bacterial concentrations based on the optical performance characteristics of the instrument, as well as estimate the confidence interval of detection. This statistical model agrees well with the limit of detection of 10 cells/mL that was found experimentally with laboratory samples. In environmental samples, active cells were immediately evident at concentrations of 10 cells/mL. Published estimates of cell densities for Enceladus plumes yield up to 10 cells/mL, which are well within the off-axis DHM's limits of detection to confidence intervals greater than or equal to 95%, assuming sufficient sample volumes can be collected. The quantitative phase imaging provided by DHM allowed minerals to be distinguished from cells. Off-axis DHM's ability for rapid low-level bacterial detection and counting shows its viability as a technique for detection of extant microbial life provided that the cells can be captured intact and delivered to the sample chamber in a sufficient volume of liquid for imaging. Key Words: In situ life detection-Extant microorganisms-Holographic microscopy-Ocean Worlds-Enceladus-Imaging. Astrobiology 17, 913-925.

摘要

要在地球及太阳系其他地方探测现存的微生物生命,需要具备识别和计数微米级、基本无特征细胞的能力。在地球上,细菌通常通过培养平板法或落射荧光显微镜进行计数。培养平板法需要较长的培养时间,且只能对可培养菌株进行计数,而落射荧光显微镜需要对样品进行大量染色和浓缩,并且其仪器不易小型化以用于太空探测。数字全息显微镜(DHM)是一种替代技术,它没有活动部件,通量比传统显微镜更高,这使得它在太空探测现存微生物方面具有潜在用途,前提是能够收集到足够数量的细胞。由于样本采集预计将成为太空任务(尤其是前往外行星的任务)的限制因素,因此量化任何用于现存生命探测的拟议技术的检测限非常重要。在这里,我们使用实验室样本和野外样本测量离轴数字全息显微镜(DHM)的检测限。基于仪器的光学性能特征,使用统计模型估计仪器在各种细菌浓度下的检测概率,并估计检测的置信区间。该统计模型与实验室样本实验得出的10个细胞/毫升的检测限非常吻合。在环境样本中,浓度为10个细胞/毫升时,活性细胞立即清晰可见。已发表的关于土卫二羽流中细胞密度的估计高达10个细胞/毫升,假设能够收集到足够的样本体积,这些密度完全在离轴DHM检测限范围内,置信区间大于或等于95%。DHM提供的定量相成像能够将矿物质与细胞区分开来。离轴DHM快速进行低水平细菌检测和计数的能力表明,只要细胞能够完整捕获并以足够的液体体积输送到样品室进行成像,它作为一种探测现存微生物生命的技术是可行的。关键词:原位生命探测 - 现存微生物 - 全息显微镜 - 海洋世界 - 土卫二 - 成像。《天体生物学》17卷,913 - 925页 。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c27/5610429/93de04b7e6ba/fig-1.jpg

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