Kaushik Karishma S, Stolhandske Jake, Shindell Orrin, Smyth Hugh D, Gordon Vernita D
Department of Molecular Biosciences, University of Texas, Austin, TX, USA.
Institute of Cellular and Molecular Biology, University of Texas, Austin, TX, USA.
NPJ Biofilms Microbiomes. 2016 May 25;2:16006. doi: 10.1038/npjbiofilms.2016.6. eCollection 2016.
Increasing antibiotic resistance and the declining rate at which new antibiotics come into use create a need to increase the efficacy of existing antibiotics. The aminoglycoside tobramycin is standard-of-care for many types of infections, including those in the lungs of cystic fibrosis (CF) patients. is a nosocomial and opportunistic pathogen that, in planktonic form, causes acute infections and, in biofilm form, causes chronic infections. Inhaled bicarbonate has recently been proposed as a therapy to improve antimicrobial properties of the CF airway surface liquid and viscosity of CF mucus. Here we measure the effect of combining tobramycin and bicarbonate against , both lab strains and CF clinical isolates. Bicarbonate synergises with tobramycin to enhance killing of planktonic bacteria. In contrast, bicarbonate antagonises with tobramycin to promote better biofilm growth. This suggests caution when evaluating bicarbonate as a therapy for CF lungs infected with biofilms. We analyse tobramycin and bicarbonate interactions using an interpolated surface methodology to measure the dose-response function. These surfaces allow more accurate estimation of combinations yielding synergy and antagonism than do standard isobolograms. By incorporating predictions based on Loewe additivity theory, we can consolidate information on a wide range of combinations that produce a complex dose-response surface, into a single number that measures the net effect. This tool thus allows rapid initial estimation of the potential benefit or harm of a therapeutic combination. Software code is freely made available as a resource for the community.
抗生素耐药性不断增加,新抗生素投入使用的速度不断下降,这就需要提高现有抗生素的疗效。氨基糖苷类药物妥布霉素是多种感染的标准治疗药物,包括囊性纤维化(CF)患者肺部的感染。是一种医院内感染和机会致病菌,以浮游形式引起急性感染,以生物膜形式引起慢性感染。吸入碳酸氢盐最近被提议作为一种疗法,以改善CF气道表面液体的抗菌特性和CF黏液的黏稠度。在这里,我们测量了妥布霉素和碳酸氢盐联合使用对实验室菌株和CF临床分离株的影响。碳酸氢盐与妥布霉素协同作用,增强对浮游细菌的杀灭作用。相比之下,碳酸氢盐与妥布霉素拮抗,促进生物膜更好地生长。这表明在评估碳酸氢盐作为感染生物膜的CF肺部的治疗方法时要谨慎。我们使用插值表面方法分析妥布霉素和碳酸氢盐的相互作用,以测量剂量反应函数。与标准等效线图相比,这些表面能更准确地估计产生协同作用和拮抗作用的组合。通过纳入基于洛维加和理论的预测,我们可以将关于产生复杂剂量反应表面的广泛组合的信息整合为一个衡量净效应的单一数字。因此,这个工具可以快速初步估计治疗组合的潜在益处或危害。软件代码作为社区资源免费提供。