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多个 PPR 蛋白相互作用参与线粒体和质体中的 RNA 编辑系统。

Multiple PPR protein interactions are involved in the RNA editing system in mitochondria and plastids.

机构信息

Laboratory of Functional Plant Biology, Department of Biology, Ghent University, B-9000 Gent, Belgium.

Molekulare Botanik, Universitaet Ulm, D-89069 Ulm, Germany.

出版信息

Proc Natl Acad Sci U S A. 2017 Aug 15;114(33):8883-8888. doi: 10.1073/pnas.1705815114. Epub 2017 Jul 31.

DOI:10.1073/pnas.1705815114
PMID:28761003
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5565447/
Abstract

Recent identification of several different types of RNA editing factors in plant organelles suggests complex RNA editosomes within which each factor has a different task. However, the precise protein interactions between the different editing factors are still poorly understood. In this paper, we show that the E-type pentatricopeptide repeat (PPR) protein SLO2, which lacks a C-terminal cytidine deaminase-like DYW domain, interacts in vivo with the DYW-type PPR protein DYW2 and the P-type PPR protein NUWA in mitochondria, and that the latter enhances the interaction of the former ones. These results may reflect a protein scaffold or complex stabilization role of NUWA between E-type PPR and DYW2 proteins. Interestingly, DYW2 and NUWA also interact in chloroplasts, and DYW2-GFP overexpressing lines show broad editing defects in both organelles, with predominant specificity for sites edited by E-type PPR proteins. The latter suggests a coordinated regulation of organellar multiple site editing through DYW2, which probably provides the deaminase activity to E editosomes.

摘要

最近在植物细胞器中鉴定出几种不同类型的 RNA 编辑因子,这表明在每个因子具有不同任务的复杂 RNA 编辑体中。然而,不同编辑因子之间的确切蛋白相互作用仍知之甚少。在本文中,我们表明,缺乏 C 端胞嘧啶脱氨酶样 DYW 结构域的 E 型五肽重复(PPR)蛋白 SLO2,在体内与 DYW 型 PPR 蛋白 DYW2 和 P 型 PPR 蛋白 NUWA 相互作用,并且后者增强了前者的相互作用。这些结果可能反映了 NUWA 在 E 型 PPR 和 DYW2 蛋白之间的蛋白支架或复合物稳定作用。有趣的是,DYW2 和 NUWA 也在叶绿体中相互作用,并且 DYW2-GFP 过表达系在两个细胞器中均表现出广泛的编辑缺陷,主要针对 E 型 PPR 蛋白编辑的位点具有特异性。后者表明通过 DYW2 对细胞器多部位编辑进行协调调节,这可能为 E 编辑体提供脱氨酶活性。

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本文引用的文献

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Proc Natl Acad Sci U S A. 2017 Aug 15;114(33):8877-8882. doi: 10.1073/pnas.1705780114. Epub 2017 Jul 31.
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A Novel Imprinted Gene NUWA Controls Mitochondrial Function in Early Seed Development in Arabidopsis.一个新的印记基因女娲控制拟南芥早期种子发育中的线粒体功能。
PLoS Genet. 2017 Jan 17;13(1):e1006553. doi: 10.1371/journal.pgen.1006553. eCollection 2017 Jan.
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SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations.SUBA4:拟南芥亚细胞蛋白质定位交互式数据分析中心
Nucleic Acids Res. 2017 Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041. Epub 2016 Nov 28.
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In Vivo Identification of Plant Protein Complexes Using IP-MS/MS.利用免疫沉淀-串联质谱法对植物蛋白复合物进行体内鉴定
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The Unexpected Diversity of Plant Organelle RNA Editosomes.植物细胞器 RNA 编辑体的意想不到的多样性。
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