Bojarowski Sławomir A, Kumar Prashant, Dominiak Paulina M
Biological and Chemical Research Center, Department of Chemistry, University of Warsaw, ul. Zwirki i Wigury 101, 02-089 Warszawa, Poland.
Acta Crystallogr B Struct Sci Cryst Eng Mater. 2017 Aug 1;73(Pt 4):598-609. doi: 10.1107/S2052520617005510. Epub 2017 Jul 28.
The strength of the University at Buffalo DataBank (UBDB) in E estimation is mainly due to charge overlap effects because the UBDB offers continuous representation of charge density which allows for a direct account of charge penetration in the derivation of electrostatic energies. In the UBDB model, these effects begin to play an important role at distances below twice the equilibrium distance and significantly increase as distances decrease. At equilibrium distances they are responsible for 30-50% of E for polar molecules and around 90% of E for nonpolar molecules. When the energy estimation from the UBDB is reduced to point multipoles, the results are comparable to point charges fitted to electrostatic potentials. On the other hand, particular components of energy from point multipole moments from the UBDB model are sensitive to the type of interaction and might be helpful in the characterization of interactions.
布法罗大学数据库(UBDB)在估算静电能(E)方面的优势主要归因于电荷重叠效应,因为UBDB提供了电荷密度的连续表示,这使得在推导静电能时能够直接考虑电荷渗透。在UBDB模型中,这些效应在距离低于平衡距离两倍时开始发挥重要作用,并随着距离减小而显著增加。在平衡距离时,它们对极性分子的静电能贡献为30 - 50%,对非极性分子的静电能贡献约为90%。当将UBDB的能量估算简化为点多极子时,结果与拟合静电势的点电荷相当。另一方面,UBDB模型中点多极矩的特定能量分量对相互作用类型敏感,可能有助于表征相互作用。