Suppr超能文献

用色散校正密度泛函理论验证X射线粉末衍射结构中缺失的空间群对称性

Validation of missed space-group symmetry in X-ray powder diffraction structures with dispersion-corrected density functional theory.

作者信息

Hempler Daniela, Schmidt Martin U, van de Streek Jacco

机构信息

Institute of Inorganic and Analytical Chemistry, Goethe University, Max-von-Laue-Strasse 7, Frankfurt am Main, 60438, Germany.

出版信息

Acta Crystallogr B Struct Sci Cryst Eng Mater. 2017 Aug 1;73(Pt 4):756-766. doi: 10.1107/S2052520617005935. Epub 2017 Jul 25.

Abstract

More than 600 molecular crystal structures with correct, incorrect and uncertain space-group symmetry were energy-minimized with dispersion-corrected density functional theory (DFT-D, PBE-D3). For the purpose of determining the correct space-group symmetry the required tolerance on the atomic coordinates of all non-H atoms is established to be 0.2 Å. For 98.5% of 200 molecular crystal structures published with missed symmetry, the correct space group is identified; there are no false positives. Very small, very symmetrical molecules can end up in artificially high space groups upon energy minimization, although this is easily detected through visual inspection. If the space group of a crystal structure determined from powder diffraction data is ambiguous, energy minimization with DFT-D provides a fast and reliable method to select the correct space group.

摘要

利用色散校正密度泛函理论(DFT-D,PBE-D3)对600多个具有正确、错误和不确定空间群对称性的分子晶体结构进行了能量最小化处理。为了确定正确的空间群对称性,将所有非氢原子的原子坐标所需的公差设定为0.2 Å。对于已发表的200个对称性缺失的分子晶体结构,98.5%的结构确定了正确的空间群;没有误判为正确的情况。非常小且非常对称的分子在能量最小化后可能会出现人为的高空间群情况,不过通过目视检查很容易检测到。如果由粉末衍射数据确定的晶体结构的空间群不明确,使用DFT-D进行能量最小化可提供一种快速可靠的方法来选择正确的空间群。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验