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嗜酸栖热放线菌的群体感应淬灭内酯酶:纯化、动力学表征、结晶及晶体学分析。

The quorum-quenching lactonase from Alicyclobacter acidoterrestris: purification, kinetic characterization, crystallization and crystallographic analysis.

作者信息

Bergonzi Celine, Schwab Michael, Chabriere Eric, Elias Mikael

机构信息

Biochemistry, Molecular Biology and Biophysics Department and BioTechnology Institute, University of Minnesota, Saint Paul, MN 55108, USA.

URMITE, Aix Marseille Université, INSERM, CNRS, IRD, 27 Boulevard Jean Moulin, 13385 Marseille, France.

出版信息

Acta Crystallogr F Struct Biol Commun. 2017 Aug 1;73(Pt 8):476-480. doi: 10.1107/S2053230X17010640. Epub 2017 Jul 26.

Abstract

Lactonases comprise a class of enzymes that hydrolyze lactones, including acyl-homoserine lactones (AHLs); the latter are used as chemical signaling molecules by numerous Gram-negative bacteria. Lactonases have therefore been demonstrated to quench AHL-based bacterial communication. In particular, lactonases are capable of inhibiting bacterial behaviors that depend on these chemicals, such as the formation of biofilms or the expression of virulence factors. A novel representative from the metallo-β-lactamase superfamily, named AaL, was isolated from the thermoacidophilic bacterium Alicyclobacter acidoterrestris. Kinetic characterization proves AaL to be a proficient lactonase, with catalytic efficiencies (k/K) against AHLs in the region of 10 M s. AaL exhibits a very broad substrate specificity. Its structure is expected to reveal the molecular determinants for its substrate binding and specificity, as well as to provide grounds for future protein-engineering projects. Here, the expression, purification, characterization, crystallization and X-ray diffraction data collection of AaL at 1.65 Å resolution are reported.

摘要

内酯酶是一类能够水解内酯的酶,包括酰基高丝氨酸内酯(AHLs);后者被众多革兰氏阴性菌用作化学信号分子。因此,内酯酶已被证明能够抑制基于AHL的细菌通讯。特别是,内酯酶能够抑制依赖于这些化学物质的细菌行为,如生物膜的形成或毒力因子的表达。从嗜热嗜酸菌酸热栖环烷芽孢杆菌中分离出一种金属β-内酰胺酶超家族的新型代表酶,命名为AaL。动力学表征证明AaL是一种高效的内酯酶,对AHLs的催化效率(k/K)在10 M⁻¹s⁻¹左右。AaL表现出非常广泛的底物特异性。其结构有望揭示其底物结合和特异性的分子决定因素,并为未来的蛋白质工程项目提供依据。本文报道了AaL在1.65 Å分辨率下的表达、纯化、表征、结晶及X射线衍射数据收集情况。

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