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烟草中花柱特异性阿拉伯半乳聚糖蛋白的多态性和结构作为花粉管生长的决定因素

Polymorphism and structure of style-specific arabinogalactan proteins as determinants of pollen tube growth in Nicotiana.

作者信息

Noyszewski Andrzej K, Liu Yi-Cheng, Tamura Koichiro, Smith Alan G

机构信息

Department of Horticultural Science, University of Minnesota, 356 Alderman Hall 1970 Folwell Av., St. Paul, MN, 55108, USA.

Present Address: Arog Pharmaceuticals, Inc, 5420 LBJ Freeway, Suite 410, Dallas, TX, 75240, USA.

出版信息

BMC Evol Biol. 2017 Aug 10;17(1):186. doi: 10.1186/s12862-017-1011-2.

Abstract

BACKGROUND

Pollen tube growth and fertilization are key processes in angiosperm sexual reproduction. The transmitting tract (TT) of Nicotiana tabacum controls pollen tube growth in part by secreting pistil extensin-like protein III (PELPIII), transmitting-tract-specific (TTS) protein and 120 kDa glycoprotein (120 K) into the stylar extracellular matrix. The three arabinogalactan proteins (AGP) are referred to as stylar AGPs and are the focus of this research. The transmitting tract regulates pollen tube growth, promoting fertilization or rejecting pollen tubes.

RESULTS

The N-terminal domain (NTD) of the stylar AGPs is proline rich and polymorphic among Nicotiana spp. The NTD was predicted to be mainly an intrinsically disordered region (IDR), making it a candidate for protein-protein interactions. The NTD is also the location for the majority of the predicted O-glycosylation sites that were variable among Nicotiana spp. The C-terminal domain (CTD) contains an Ole e 1-like domain, that was predicted to form beta-sheets that are similar in position and length among Nicotiana spp. and among stylar AGPs. The TTS protein had the greatest amino acid and predicted O-glycosylation conservation among Nicotiana spp. relative to the PELPIII and 120 K. The PELPIII, TTS and 120 K genes undergo negative selection, with d/d ratios of 0.59, 0.29 and 0.38 respectively. The d/d ratio for individual species ranged from 0.4 to 0.9 and from 0.1 to 0.8, for PELPIII and TTS genes, respectively. These data indicate that PELPIII and TTS genes are under different selective pressures. A newly discovered AGP gene, Nicotiana tabacum Proline Rich Protein (NtPRP), was found with a similar intron-exon configuration and protein structure resembling other stylar AGPs, particularly TTS.

CONCLUSIONS

Further studies of the NtPRP gene are necessary to elucidate its biological role. Due to its high similarity to the TTS gene, NtPRP may be involved in pollen tube guidance and growth. In contrast to TTS, both PELPIII and 120 K genes are more diverse indicating a possible role in speciation or mating preference of Nicotiana spp. We hypothesize that the stylar AGPs and NtPRP share a common origin from a single gene that duplicated and diversified into four distinct genes involved in pollen-style interactions.

摘要

背景

花粉管生长和受精是被子植物有性生殖中的关键过程。烟草的花粉管通道(TT)通过向花柱细胞外基质分泌雌蕊伸展蛋白样蛋白III(PELPIII)、花粉管通道特异性(TTS)蛋白和120 kDa糖蛋白(120K)来部分控制花粉管生长。这三种阿拉伯半乳聚糖蛋白(AGP)被称为花柱AGP,是本研究的重点。花粉管通道调节花粉管生长,促进受精或排斥花粉管。

结果

花柱AGP的N端结构域(NTD)富含脯氨酸,在烟草属植物中具有多态性。NTD预计主要是一个内在无序区域(IDR),使其成为蛋白质-蛋白质相互作用的候选者。NTD也是大多数预测的O-糖基化位点的位置,这些位点在烟草属植物中是可变的。C端结构域(CTD)包含一个类似Ole e 1的结构域,预计会形成β-折叠,在烟草属植物之间以及花柱AGP之间,其位置和长度相似。相对于PELPIII和120K,TTS蛋白在烟草属植物中具有最大的氨基酸和预测的O-糖基化保守性。PELPIII、TTS和120K基因经历负选择,d/d比值分别为0.59、0.29和0.38。PELPIII和TTS基因的单个物种的d/d比值分别为0.4至0.9和0.1至0.8。这些数据表明PELPIII和TTS基因处于不同的选择压力之下。发现了一个新的AGP基因,烟草富含脯氨酸蛋白(NtPRP),其内含子-外显子结构和蛋白质结构与其他花柱AGP相似,特别是与TTS相似。

结论

有必要对NtPRP基因进行进一步研究以阐明其生物学作用。由于其与TTS基因高度相似,NtPRP可能参与花粉管引导和生长。与TTS相反,PELPIII和120K基因更多样化,表明它们可能在烟草属植物的物种形成或交配偏好中发挥作用。我们假设花柱AGP和NtPRP来自一个单一基因的共同起源,该基因复制并多样化成四个参与花粉-花柱相互作用的不同基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c3c/5553597/d8977b7b6ce2/12862_2017_1011_Fig1_HTML.jpg

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