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一项关于包含联合DNA索引系统(CODIS)核心位点和欧洲标准集位点的新一代多重短串联重复序列(STR)试剂盒的初步评估研究。

A preliminary evaluation study of new generation multiplex STR kits comprising of the CODIS core loci and the European Standard Set loci.

作者信息

Tan Jolena Ying Ying, Tan Yuen Peng, Ng Shilen, Tay Annabel Suan, Phua Yong Han, Tan Wei Jie, Ong Terenze Yao Rui, Chua Li Min, Syn Christopher Kiu Choong

机构信息

DNA Profiling Laboratory, Applied Sciences Group, Health Sciences Authority, 11 Outram Road, 169078, Singapore.

DNA Profiling Laboratory, Applied Sciences Group, Health Sciences Authority, 11 Outram Road, 169078, Singapore.

出版信息

J Forensic Leg Med. 2017 Nov;52:16-23. doi: 10.1016/j.jflm.2017.07.017. Epub 2017 Jul 25.

Abstract

The GlobalFiler™ (Life Technologies), Investigator 24plex QS (Qiagen), and PowerPlex Fusion 6C (Promega) kits are the latest generation 6-dye fluorescent chemistry STR-PCR amplification kits. These kits allow for the simultaneous amplification of the CODIS core loci and the European Standard Set loci, as well as a few Y-STR loci in addition to the standard sex-determining marker Amelogenin. The present study was designed to be a preliminary evaluation of the three STR-PCR kits in terms of sensitivity, profile recovery from degraded DNA samples, tolerance to PCR inhibitors, and detection of minor components in DNA mixtures. The results showed that the three STR-PCR kits had relatively similar performance with each kit faring better for the different aspects studied. The PowerPlex Fusion 6C and the Investigator 24plex QS kits were shown to tolerate inhibitors better, while the GlobalFiler™ kit appeared to have a higher mean percentage recovery of alleles from low template DNA samples and for minor components in DNA mixtures.

摘要

GlobalFiler™(赛默飞世尔科技公司)、Investigator 24plex QS(Qiagen公司)和PowerPlex Fusion 6C(普洛麦格公司)试剂盒是最新一代的六染料荧光化学STR-PCR扩增试剂盒。这些试剂盒能够同时扩增联合DNA索引系统(CODIS)核心基因座和欧洲标准组基因座,除了标准性别决定标记物牙釉蛋白外,还能扩增一些Y染色体STR基因座。本研究旨在对这三种STR-PCR试剂盒在灵敏度、从降解DNA样本中恢复图谱、对PCR抑制剂的耐受性以及检测DNA混合物中的次要成分等方面进行初步评估。结果表明,这三种STR-PCR试剂盒表现相对相似,每种试剂盒在不同研究方面各有优势。PowerPlex Fusion 6C试剂盒和Investigator 24plex QS试剂盒对抑制剂的耐受性更好,而GlobalFiler™试剂盒从低模板DNA样本和DNA混合物中的次要成分中回收等位基因的平均百分比似乎更高。

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