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细胞外DNA释放的机制、调控及其在微生物群落中的生物学作用

Mechanisms and Regulation of Extracellular DNA Release and Its Biological Roles in Microbial Communities.

作者信息

Ibáñez de Aldecoa Alejandra L, Zafra Olga, González-Pastor José E

机构信息

Laboratory of Molecular Adaptation, Department of Molecular Evolution, Centro de Astrobiología (Consejo Superior de Investigaciones Científicas/Instituto Nacional de Técnica Aeroespacial)Madrid, Spain.

Experimental Sciences Faculty, Francisco de Vitoria UniversityMadrid, Spain.

出版信息

Front Microbiol. 2017 Jul 26;8:1390. doi: 10.3389/fmicb.2017.01390. eCollection 2017.

Abstract

The capacity to release genetic material into the extracellular medium has been reported in cultures of numerous species of bacteria, archaea, and fungi, and also in the context of multicellular microbial communities such as biofilms. Moreover, extracellular DNA (eDNA) of microbial origin is widespread in natural aquatic and terrestrial environments. Different specific mechanisms are involved in eDNA release, such as autolysis and active secretion, as well as through its association with membrane vesicles. It is noteworthy that in microorganisms, in which DNA release has been studied in detail, the production of eDNA is coordinated by the population when it reaches a certain cell density, and is induced in a subpopulation in response to the accumulation of quorum sensing signals. Interestingly, in several bacteria there is also a relationship between eDNA release and the development of natural competence (the ability to take up DNA from the environment), which is also controlled by quorum sensing. Then, what is the biological function of eDNA? A common biological role has not been proposed, since different functions have been reported depending on the microorganism. However, it seems to be important in biofilm formation, can be used as a nutrient source, and could be involved in DNA damage repair and gene transfer. This review covers several aspects of eDNA research: (i) its occurrence and distribution in natural environments, (ii) the mechanisms and regulation of its release in cultured microorganisms, and (iii) its biological roles. In addition, we propose that eDNA release could be considered a social behavior, based on its quorum sensing-dependent regulation and on the described functions of eDNA in the context of microbial communities.

摘要

在众多细菌、古菌和真菌的培养物中,以及在生物膜等多细胞微生物群落的背景下,都有将遗传物质释放到细胞外介质中的能力的报道。此外,微生物来源的细胞外DNA(eDNA)在天然水生和陆地环境中广泛存在。eDNA释放涉及不同的特定机制,如自溶和主动分泌,以及通过其与膜泡的关联。值得注意的是,在已对DNA释放进行详细研究的微生物中,当群体达到一定细胞密度时,eDNA的产生由群体协调,并在一个亚群体中因群体感应信号的积累而被诱导。有趣的是,在几种细菌中,eDNA释放与自然感受态(从环境中摄取DNA的能力)的发展之间也存在关联,而自然感受态也受群体感应控制。那么,eDNA的生物学功能是什么呢?尚未提出一个共同的生物学作用,因为根据微生物的不同,已报道了不同的功能。然而,它似乎在生物膜形成中很重要,可以用作营养源,并且可能参与DNA损伤修复和基因转移。本综述涵盖了eDNA研究的几个方面:(i)其在自然环境中的存在和分布,(ii)其在培养微生物中释放的机制和调控,以及(iii)其生物学作用。此外,基于其群体感应依赖性调控以及在微生物群落背景下所描述的eDNA功能,我们提出eDNA释放可被视为一种社会行为。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86ee/5527159/a7e2cdd2c2a0/fmicb-08-01390-g0001.jpg

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