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eIF5B 突变通过翻译缺陷导致. 的热敏和多效表型。

Mutations in eIF5B Confer Thermosensitive and Pleiotropic Phenotypes via Translation Defects in .

机构信息

State Key Laboratory for Agrobiotechnology and Key Laboratory of Crop Heterosis and Utilization (MOE), Beijing Key Laboratory of Crop Genetic Improvement, Department of Plant Genetics and Breeding, China Agricultural University, Beijing 100193, P.R. China.

National Research Centre on Plant Biotechnology, New Delhi 110012, India.

出版信息

Plant Cell. 2017 Aug;29(8):1952-1969. doi: 10.1105/tpc.16.00808. Epub 2017 Aug 14.

DOI:10.1105/tpc.16.00808
PMID:28808135
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5590492/
Abstract

The conserved eukaryotic translation initiation factor 5B, eIF5B, is a GTPase that acts late in translation initiation. We found that an mutant sensitive to temperatures 3 (), which behaves as the wild type in the absence of stress but is unable to acclimate to high temperature, carries a missense mutation in the gene (At1g76810), producing a temperature sensitive protein. A more severe, T-DNA insertion allele () causes pleiotropic developmental phenotypes. Surprisingly, Arabidopsis has three other genes that do not substitute for ; two of these appear to be in the process of pseudogenization. Polysome profiling and RNA-seq analysis of plants show delayed recovery of polysomes after heat stress and reduced translational efficiency (TE) of a subset of stress protective proteins, demonstrating the critical role of translational control early in heat acclimation. Plants carrying the severe allele show decreased TE of auxin-regulated, ribosome-related, and electron transport genes, even under optimal growth conditions. The data suggest that disrupting specific eIF5B interactions on the ribosome can, directly or indirectly, differentially affect translation. Thus, modulating eIF5B interactions could be another mechanism of gene-specific translational control.

摘要

真核翻译起始因子 5B(eIF5B)是一种高度保守的 GTP 酶,在翻译起始的晚期发挥作用。我们发现,一种对 3()高温敏感的 突变体,在没有应激的情况下表现为野生型,但无法适应高温,其 基因(At1g76810)发生了错义突变,产生了一种温度敏感的蛋白质。一个更严重的 T-DNA 插入等位基因()导致了多种发育表型。令人惊讶的是,拟南芥还有另外三个 基因不能替代;其中两个似乎正在经历假基因化的过程。对 突变体植物的多核糖体分析和 RNA-seq 分析表明,在热应激后多核糖体的恢复延迟,并且一部分应激保护蛋白的翻译效率(TE)降低,这表明在热适应的早期,翻译控制起着至关重要的作用。即使在最佳生长条件下,携带严重 等位基因的植物也表现出生长素调节、核糖体相关和电子传递基因的 TE 降低。这些数据表明,破坏核糖体上特定的 eIF5B 相互作用可以直接或间接地对翻译产生不同的影响。因此,调节 eIF5B 相互作用可能是基因特异性翻译控制的另一种机制。

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本文引用的文献

1
eIF1A/eIF5B interaction network and its functions in translation initiation complex assembly and remodeling.真核起始因子1A/真核起始因子5B相互作用网络及其在翻译起始复合物组装与重塑中的功能
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Genome-wide assessment of differential translations with ribosome profiling data.利用核糖体谱数据进行全基因组差异翻译评估。
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Improved Ribosome-Footprint and mRNA Measurements Provide Insights into Dynamics and Regulation of Yeast Translation.改进的核糖体足迹和 mRNA 测量为研究酵母翻译的动态和调控提供了新的见解。
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Arabidopsis ribosomal proteins control vacuole trafficking and developmental programs through the regulation of lipid metabolism.拟南芥核糖体蛋白通过调节脂质代谢来控制液泡运输和发育程序。
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X-ray structures of eIF5B and the eIF5B-eIF1A complex: the conformational flexibility of eIF5B is restricted on the ribosome by interaction with eIF1A.真核起始因子5B(eIF5B)及eIF5B-eIF1A复合物的X射线结构:eIF5B的构象灵活性在核糖体上通过与eIF1A相互作用而受到限制。
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Transcriptome-wide characterization of the eIF4A signature highlights plasticity in translation regulation.全转录组范围内对真核起始因子4A(eIF4A)特征的表征突出了翻译调控中的可塑性。
Genome Biol. 2014;15(10):476. doi: 10.1186/s13059-014-0476-1.
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Upregulation of eIF5B controls cell-cycle arrest and specific developmental stages.真核生物翻译起始因子5B(eIF5B)的上调控制细胞周期停滞和特定发育阶段。
Proc Natl Acad Sci U S A. 2014 Oct 14;111(41):E4315-22. doi: 10.1073/pnas.1320477111. Epub 2014 Sep 26.