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新种肠道中村氏菌,从日本伪吻棘头虫粪便中分离得到。

Nakamurella intestinalis sp. nov., isolated from the faeces of Pseudorhynchus japonicus.

作者信息

Kim Soo-Jin, Cho Hayoung, Joa Jae-Ho, Hamada Moriyuki, Ahn Jae-Hyung, Weon Hang-Yeon, Kwon Soon-Wo

机构信息

Agricultural Microbiology Division, National Institute of Agricultural Sciences, Rural Development Administration, Wanju-gun, Jeollabuk-do 55365, Republic of Korea.

National Institute of Horticultural & Herbal Science, Rural Development Administration, Jeju 63240, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2017 Aug;67(8):2970-2974. doi: 10.1099/ijsem.0.002059. Epub 2017 Aug 18.

Abstract

One strain, designated 63MJ-1T, was isolated from fresh faeces of broad-winged katydids collected in Jinan-gun, Jeollabuk-do, the Republic of Korea. The organism stained Gram-positive and was an aerobic, non-flagellated and short-rod-shaped bacterium. The organism grew in the range of 4-35 °C (optimum, 28-30 °C) and pH 6.0-9.0 (optimum, pH 7.0), and in the presence of 5 % NaCl (w/v), but not in media containing 7 % NaCl. According to the 16S rRNA gene sequence analysis, strain 63MJ-1T showed the highest sequence similarities with Nakamurella panacisegetis P4-7T (95.9 %), Nakamurella endophytica 2Q3S-4-2T (95.8 %) and Nakamurella multipartita DSM 44233T (95.7 %). Phylogenetic trees also indicated that strain 63MJ-1T formed one robust cluster with members of the genusNakamurella. The predominant quinone of strain 63MJ-1T was MK-8(H4). Polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, an unidentified aminophospholipid and two unidentified lipids. The major fatty acids were C16 : 0, anteiso-C15 : 0 and iso-C15 : 0. The peptidoglycan type was A1γ with meso-diaminopimelic acid as the diagnostic amino acid. The DNA G+C content was 64.6 mol%. Based on the phylogenetic, physiological and chemotaxonomic data, it was demonstrated that strain 63MJ-1T represents a novel species of the genus Nakamurella, for which the name Nakamurella intestinalis sp. nov. is proposed. The type strain is 63MJ-1T (=KACC 18662T=NBRC 111844T).

摘要

从韩国全罗北道金堤郡采集的阔翅螽斯新鲜粪便中分离出一株菌株,命名为63MJ-1T。该菌革兰氏染色呈阳性,为需氧、无鞭毛的短杆状细菌。该菌在4-35°C(最适温度为28-30°C)和pH 6.0-9.0(最适pH为7.0)的环境中生长,且能在含5%(w/v)NaCl的培养基中生长,但不能在含7% NaCl的培养基中生长。根据16S rRNA基因序列分析,菌株63MJ-1T与人参中 Nakamurella panacisegetis P4-7T(95.9%)、内生 Nakamurella endophytica 2Q3S-4-2T(95.8%)和多分 Nakamurella multipartita DSM 44233T(95.7%)的序列相似性最高。系统发育树也表明,菌株63MJ-1T与 Nakamurella 属的成员形成了一个稳定的聚类。菌株63MJ-1T的主要醌类为MK-8(H4)。极性脂类为双磷脂酰甘油、磷脂酰乙醇胺、磷脂酰肌醇、一种未鉴定的氨基磷脂和两种未鉴定的脂类。主要脂肪酸为C16 : 0、anteiso-C15 : 0和iso-C15 : 0。肽聚糖类型为A1γ,以中-二氨基庚二酸作为诊断性氨基酸。DNA G+C含量为64.6 mol%。基于系统发育、生理和化学分类学数据,证明菌株63MJ-1T代表 Nakamurella 属的一个新物种,为此提出新名称 Nakamurella intestinalis sp. nov.。模式菌株为63MJ-1T(=KACC 18662T=NBRC 111844T)。

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