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用于非人灵长类动物在转化研究中应用的基因组学工具。

Genomic Tools for the Use of Nonhuman Primates in Translational Research.

作者信息

Harding John D

机构信息

National Institutes of Health, Bethesda, Maryland.

出版信息

ILAR J. 2017 Jul 1;58(1):59-68. doi: 10.1093/ilar/ilw042.

Abstract

Nonhuman primates (NHPs) are important preclinical models for understanding the etiology of human diseases and for developing therapies and vaccines to cure or eliminate disease. Most human diseases have genetic components. Therefore, to be of maximal utility, the NHP species used for translational science should be as well characterized in regard to their genome and transcriptome as possible. This article reviews the current status of genomic information for the five NHP species used most often in translational research: rhesus macaque, cynomolgus macaque, vervet (African green) monkey, baboon, and marmoset NHP. These species have published whole genome sequences (with the exception of the baboon) and relatively well-characterized transcriptomes. Some have also been characterized in regard to specific genetic loci that are particularly related to translational concerns, such as the major histocompatability complex and the cytochrome P40 genes. Genomic resources to aid in stratifying captive populations in regard to genetic and phenotypic characteristics have been developed as an aid to enhancing reproducibility and facilitating more efficient use of animals. Taken together, the current genomic resources and numerous studies currently underway to improve them should enhance the value of NHPs as preclinical models of human disease.

摘要

非人灵长类动物(NHPs)是理解人类疾病病因以及开发治疗方法和疫苗以治愈或消除疾病的重要临床前模型。大多数人类疾病都有遗传成分。因此,为了发挥最大效用,用于转化科学的非人灵长类动物物种应尽可能在基因组和转录组方面得到充分表征。本文综述了在转化研究中最常使用的五种非人灵长类动物物种的基因组信息现状:恒河猴、食蟹猴、绿猴(非洲绿猴)、狒狒和狨猴。这些物种已发表了全基因组序列(狒狒除外),并且转录组特征相对良好。有些物种还在与转化问题特别相关的特定基因座方面得到了表征,例如主要组织相容性复合体和细胞色素P40基因。为了帮助根据遗传和表型特征对圈养种群进行分层,已经开发了基因组资源,以提高实验的可重复性并促进更有效地利用动物。总体而言,目前的基因组资源以及目前正在进行的众多改进研究应会提高非人灵长类动物作为人类疾病临床前模型的价值。

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