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来自海鲜的耐甲氧西林分离株（序列类型1）的基因组序列草图

Draft Genome Sequence of a Methicillin-Resistant Isolate (Sequence Type 1) from Seafood.

作者信息

Sivaraman G K, Vanik Deesha, Visnuvinayagam S, Prasad M M, Ravishankar C N

机构信息

Regional Centre of ICAR-Central Institute of Fisheries Technology, Veraval, Gujarat, India

Regional Centre of ICAR-Central Institute of Fisheries Technology, Veraval, Gujarat, India.

出版信息

Genome Announc. 2017 Aug 24;5(34):e00776-17. doi: 10.1128/genomeA.00776-17.

DOI:10.1128/genomeA.00776-17
PMID:28839017
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5571403/
Abstract

The draft genome sequence of a methicillin-resistant (MRSA) isolate (sequence type 1 [ST 1]) from the salted dried ribbonfish from Gujarat, India, is reported here. genus-specific genes were present in this MRSA isolate. The whole-genome sequence of this strain contains 2,797 protein-coding genes and 80 RNAs within the 2.85-Mb genome.

摘要

本文报道了从印度古吉拉特邦咸干带鱼中分离出的一株耐甲氧西林金黄色葡萄球菌（MRSA，序列类型1 [ST1]）的基因组序列草图。该MRSA分离株中存在属特异性基因。该菌株的全基因组序列在2.85 Mb的基因组中包含2797个蛋白质编码基因和80个RNA。

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tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.tRNAscan-SE：用于改进基因组序列中转运RNA基因检测的程序。
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