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从海鲜中分离出的耐甲氧西林序列类型39葡萄球菌菌株的基因组序列草图

Draft Genome Sequence of a Methicillin-Resistant Sequence Type 39 Staphylococcal Isolate Obtained from Seafood.

作者信息

Sivaraman G K, Vanik Deesha, Visnuvinayagam S, Prasad Mothadaka Mukteswar, Murugadas V, Nadella Ranjit Kumar, Ravishankar C N

机构信息

Regional Centre of ICAR-Central Institute of Fisheries Technology, Veraval, Gujarat State, India

Regional Centre of ICAR-Central Institute of Fisheries Technology, Veraval, Gujarat State, India.

出版信息

Genome Announc. 2017 Nov 9;5(45):e01193-17. doi: 10.1128/genomeA.01193-17.

DOI:10.1128/genomeA.01193-17
PMID:29122867
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5679800/
Abstract

The draft genome sequence of a methicillin-resistant (MRSA) sequence type 39 (ST 39) isolate obtained from the dried ribbonfish of Gujarat, India, is reported here. -specific genes were present in this MRSA isolate. The whole-genome sequence of this strain contains 2,693 protein-coding genes and 70 RNAs within the 2.82-Mb genome.

摘要

本文报道了从印度古吉拉特邦的干带鱼中分离出的一株耐甲氧西林金黄色葡萄球菌（MRSA）序列类型39（ST39）菌株的基因组序列草图。该MRSA分离株中存在特定基因。该菌株的全基因组序列在2.82 Mb的基因组内包含2693个蛋白质编码基因和70个RNA。

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本文引用的文献

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Draft Genome Sequence of a Methicillin-Resistant Isolate (Sequence Type 1) from Seafood.来自海鲜的耐甲氧西林分离株（序列类型1）的基因组序列草图
Genome Announc. 2017 Aug 24;5(34):e00776-17. doi: 10.1128/genomeA.00776-17.
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Improved microbial gene identification with GLIMMER.利用GLIMMER改进微生物基因识别。
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tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.tRNAscan-SE：用于改进基因组序列中转运RNA基因检测的程序。
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