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面包小麦中降低株高基因的分子定位

Molecular Mapping of Reduced Plant Height Gene in Bread Wheat.

作者信息

Tian Xiuling, Wen Weie, Xie Li, Fu Luping, Xu Dengan, Fu Chao, Wang Desen, Chen Xinmin, Xia Xianchun, Chen Quanjia, He Zhonghu, Cao Shuanghe

机构信息

College of Agronomy, Xinjiang Agricultural UniversityUrumqi, China.

Institute of Crop Science, National Wheat Improvement Center, Chinese Academy of Agricultural SciencesBeijing, China.

出版信息

Front Plant Sci. 2017 Aug 8;8:1379. doi: 10.3389/fpls.2017.01379. eCollection 2017.

Abstract

Height is an important trait related to plant architecture and yield potential in bread wheat ( L.). We previously identified a major quantitative trait locus flanked by simple sequence repeat markers and that reduced height by 8.0-10.4%. Here , designated as , was confirmed using recombinant inbred lines (RILs) derived from a Jingdong 8/Aikang 58 cross. The target sequences of and were used as queries to BLAST against International Wheat Genome Sequence Consortium database and hit a super scaffold of approximately 208 Mb. Based on gene annotation of the scaffold, three gene-specific markers were developed to genotype the RILs, and was narrowed to a 1.85 cM interval between and . In addition, three single nucleotide polymorphism (SNP) markers linked to were identified from SNP chip-based screening in combination with bulked segregant analysis. The allelic efficacy of was validated in 242 elite wheat varieties using and markers. These showed a significant association between genotypes and plant height. reduced plant height by an average of 6.0-7.9 cm across environments and were significantly associated with an increased TGW of 2.0-3.4 g. The findings indicate that is a common dwarfing gene in wheat breeding, and and can be used for marker-assisted selection.

摘要

株高是与面包小麦(Triticum aestivum L.)株型和产量潜力相关的重要性状。我们之前鉴定出一个主要的数量性状位点,其两侧为简单序列重复标记Xcfd89和Xbarc184,该位点使株高降低了8.0 - 10.4%。在此,利用京冬8号/矮抗58杂交衍生的重组自交系(RILs)对命名为Rht-B1b的该位点进行了验证。将Xcfd89和Xbarc184的目标序列用作查询序列,针对国际小麦基因组测序联盟数据库进行BLAST比对,命中了一个约208 Mb的超级支架。基于该支架的基因注释,开发了三个基因特异性标记对RILs进行基因分型,Rht-B1b被定位到Xcfd89和Xbarc184之间1.85 cM的区间内。此外,通过基于SNP芯片的筛选结合混合分组分析法,鉴定出了三个与Rht-B1b连锁的单核苷酸多态性(SNP)标记。利用Xcfd89和Xbarc184标记在242个优良小麦品种中验证了Rht-B1b的等位基因效应。这些结果表明基因型与株高之间存在显著关联。Rht-B1b在不同环境下使株高平均降低6.0 - 7.9 cm,并且与千粒重增加2.0 - 3.4 g显著相关。研究结果表明,Rht-B1b是小麦育种中一个常见的矮秆基因,Xcfd89和Xbarc184可用于分子标记辅助选择。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2886/5550838/6259db600c3b/fpls-08-01379-g001.jpg

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