Burlina Philippe, Billings Seth, Joshi Neil, Albayda Jemima
Applied Physics Laboratory, Johns Hopkins University, Laurel, Maryland, United States of America.
Division of Rheumatology, Johns Hopkins School of Medicine, Baltimore, Maryland, United States of America.
PLoS One. 2017 Aug 30;12(8):e0184059. doi: 10.1371/journal.pone.0184059. eCollection 2017.
To evaluate the use of ultrasound coupled with machine learning (ML) and deep learning (DL) techniques for automated or semi-automated classification of myositis.
Eighty subjects comprised of 19 with inclusion body myositis (IBM), 14 with polymyositis (PM), 14 with dermatomyositis (DM), and 33 normal (N) subjects were included in this study, where 3214 muscle ultrasound images of 7 muscles (observed bilaterally) were acquired. We considered three problems of classification including (A) normal vs. affected (DM, PM, IBM); (B) normal vs. IBM patients; and (C) IBM vs. other types of myositis (DM or PM). We studied the use of an automated DL method using deep convolutional neural networks (DL-DCNNs) for diagnostic classification and compared it with a semi-automated conventional ML method based on random forests (ML-RF) and "engineered" features. We used the known clinical diagnosis as the gold standard for evaluating performance of muscle classification.
The performance of the DL-DCNN method resulted in accuracies ± standard deviation of 76.2% ± 3.1% for problem (A), 86.6% ± 2.4% for (B) and 74.8% ± 3.9% for (C), while the ML-RF method led to accuracies of 72.3% ± 3.3% for problem (A), 84.3% ± 2.3% for (B) and 68.9% ± 2.5% for (C).
This study demonstrates the application of machine learning methods for automatically or semi-automatically classifying inflammatory muscle disease using muscle ultrasound. Compared to the conventional random forest machine learning method used here, which has the drawback of requiring manual delineation of muscle/fat boundaries, DCNN-based classification by and large improved the accuracies in all classification problems while providing a fully automated approach to classification.
评估超声结合机器学习(ML)和深度学习(DL)技术在肌炎自动或半自动分类中的应用。
本研究纳入了80名受试者,其中包括19名包涵体肌炎(IBM)患者、14名多发性肌炎(PM)患者、14名皮肌炎(DM)患者和33名正常(N)受试者,共采集了7块肌肉(双侧观察)的3214张肌肉超声图像。我们考虑了三个分类问题,包括(A)正常与患病(DM、PM、IBM);(B)正常与IBM患者;以及(C)IBM与其他类型的肌炎(DM或PM)。我们研究了使用深度卷积神经网络的自动DL方法(DL-DCNN)进行诊断分类,并将其与基于随机森林(ML-RF)和“工程”特征的半自动传统ML方法进行比较。我们将已知的临床诊断作为评估肌肉分类性能的金标准。
DL-DCNN方法在问题(A)中的准确率±标准差为76.2%±3.1%,在问题(B)中为86.6%±2.4%,在问题(C)中为74.8%±3.9%,而ML-RF方法在问题(A)中的准确率为72.3%±3.3%,在问题(B)中为84.3%±2.3%,在问题(C)中为68.9%±2.5%。
本研究展示了机器学习方法在使用肌肉超声对炎性肌肉疾病进行自动或半自动分类中的应用。与这里使用的传统随机森林机器学习方法相比,该方法存在需要手动描绘肌肉/脂肪边界的缺点,基于DCNN的分类总体上提高了所有分类问题的准确率,同时提供了一种完全自动化的分类方法。