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采用热休克蛋白65聚合酶链反应-限制性片段长度多态性分析对疑似结核病患者的非结核分枝杆菌菌株进行分型

Distribution of non-tuberculosis mycobacteria strains from suspected tuberculosis patients by heat shock protein 65 PCR-RFLP.

作者信息

Nour-Neamatollahie Ali, Ebrahimzadeh Nayereh, Siadat Seyed Davar, Vaziri Farzam, Eslami Mona, Akhavan Sepahi Abbas, Khanipour Sharareh, Masoumi Morteza, Sakhaee Fatemeh, Ghazanfari Jajin Morteza, Bahrmand Ahmadreza, Fateh Abolfazl

机构信息

Departments of Mycobacteriology & Pulmonary Research, Pasteur Institute of Iran, Tehran, Iran.

Department of Microbiology, College of Basic Science, Islamic Azad University, Tehran North Branch, Tehran, Iran.

出版信息

Saudi J Biol Sci. 2017 Sep;24(6):1380-1386. doi: 10.1016/j.sjbs.2016.02.001. Epub 2016 Feb 6.

Abstract

The genus contains more than 150 species. Non-tuberculosis mycobacteria (NTM) often cause extrapulmonary and pulmonary disease. Mycobacteria detection at species level is necessary and provides useful information on epidemiology and facilitates successful treatment of patients. This retrospective study aimed to determine the incidence of the NTM isolates and (Mtb) in clinical specimens collected from Iranian patients during February 2011-December 2013, by PCR-restriction fragment length polymorphism analysis (PRA) of the gene. We applied conventional biochemical test and -PRA identification assay to identify species of mycobacteria in specimens from patients suspected of having mycobacterial isolates. This method was a sensitive, specific and effective assay for detecting mycobacterial species and had a 100% sensitivity and specificity for Mtb and (MAC) species. Using PRA for 380 mycobacterial selected isolates, including 317 Mtb, four and of the 59 clinical isolates, the most commonly identified organism was (35.6%), followed by (16.9%), (16.9%), (5.1%), (5.1%), (5.1%), (3.4%), (3.4%), (3.4%), (3.4%) and (1.7%). PRA method, in comparison with classical methods, is rapid, useful and sensitive for the phylogenetic analysis and species detection of mycobacterial strains. is the most common cause of infection by NTM in patients with non-HIV and HIV which demonstrated a high outbreak and diversity of NTM strains in our laboratory.

摘要

该属包含150多种物种。非结核分枝杆菌(NTM)常引起肺外和肺部疾病。在种水平上检测分枝杆菌是必要的,可为流行病学提供有用信息,并有助于患者的成功治疗。这项回顾性研究旨在通过对基因进行聚合酶链反应-限制性片段长度多态性分析(PRA),确定2011年2月至2013年12月期间从伊朗患者收集的临床标本中NTM分离株和结核分枝杆菌(Mtb)的发生率。我们应用传统生化试验和PRA鉴定分析法,对疑似有分枝杆菌分离株的患者标本中的分枝杆菌种类进行鉴定。该方法是一种检测分枝杆菌种类的灵敏、特异且有效的分析方法,对结核分枝杆菌和鸟分枝杆菌复合群(MAC)种类具有100%的灵敏度和特异性。对380株选定的分枝杆菌分离株(包括317株结核分枝杆菌、4株MAC和59株临床分离株)使用PRA,最常鉴定出的菌株是鸟分枝杆菌(35.6%),其次是胞内分枝杆菌(16.9%)、脓肿分枝杆菌(16.9%)、龟分枝杆菌(5.1%)、堪萨斯分枝杆菌(5.1%)、偶发分枝杆菌(5.1%)、马尔摩分枝杆菌(3.4%)、溃疡分枝杆菌(3.4%)、嗜血分枝杆菌(3.4%)、戈登分枝杆菌(3.4%)和蟾分枝杆菌(1.7%)。与经典方法相比,PRA方法对于分枝杆菌菌株的系统发育分析和种类检测快速、有用且灵敏。鸟分枝杆菌是未感染HIV和感染HIV患者中NTM感染的最常见原因,在我们实验室中显示出NTM菌株的高爆发率和多样性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5eb/5562452/655a36fced5a/gr1.jpg

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