Suppr超能文献

产油米曲霉BCC7051的基因组特征:一个潜在的基于真菌的脂质生产平台

Genome Characterization of Oleaginous Aspergillus oryzae BCC7051: A Potential Fungal-Based Platform for Lipid Production.

作者信息

Thammarongtham Chinae, Nookaew Intawat, Vorapreeda Tayvich, Srisuk Tanawut, Land Miriam L, Jeennor Sukanya, Laoteng Kobkul

机构信息

Biochemical Engineering and Pilot Plant Research and Development Laboratory, National Center for Genetic Engineering and Biotechnology (BIOTEC), King Mongkut's University of Technology Thonburi, Bangkhuntien, Bangkok, 10150, Thailand.

Department of Biomedical Informatics, College of Medicine, University of Arkansas for Medical Sciences, Little Rock, AR, USA.

出版信息

Curr Microbiol. 2018 Jan;75(1):57-70. doi: 10.1007/s00284-017-1350-7. Epub 2017 Sep 1.

Abstract

The selected robust fungus, Aspergillus oryzae strain BCC7051 is of interest for biotechnological production of lipid-derived products due to its capability to accumulate high amount of intracellular lipids using various sugars and agro-industrial substrates. Here, we report the genome sequence of the oleaginous A. oryzae BCC7051. The obtained reads were de novo assembled into 25 scaffolds spanning of 38,550,958 bps with predicted 11,456 protein-coding genes. By synteny mapping, a large rearrangement was found in two scaffolds of A. oryzae BCC7051 as compared to the reference RIB40 strain. The genetic relationship between BCC7051 and other strains of A. oryzae in terms of aflatoxin production was investigated, indicating that the A. oryzae BCC7051 was categorized into group 2 nonaflatoxin-producing strain. Moreover, a comparative analysis of the structural genes focusing on the involvement in lipid metabolism among oleaginous yeast and fungi revealed the presence of multiple isoforms of metabolic enzymes responsible for fatty acid synthesis in BCC7051. The alternative routes of acetyl-CoA generation as oleaginous features and malate/citrate/pyruvate shuttle were also identified in this A. oryzae strain. The genome sequence generated in this work is a dedicated resource for expanding genome-wide study of microbial lipids at systems level, and developing the fungal-based platform for production of diversified lipids with commercial relevance.

摘要

所选的健壮真菌米曲霉BCC7051因其能够利用各种糖类和农业工业底物积累大量细胞内脂质而在生物技术生产脂质衍生产品方面备受关注。在此,我们报告了产油米曲霉BCC7051的基因组序列。获得的 reads 被从头组装成 25 个支架,跨度为 38,550,958 碱基对,预测有 11,456 个蛋白质编码基因。通过共线性图谱分析,发现米曲霉BCC7051的两个支架与参考菌株RIB40相比存在大规模重排。研究了BCC7051与其他米曲霉菌株在黄曲霉毒素产生方面的遗传关系,表明米曲霉BCC7051被归类为第2组非黄曲霉毒素产生菌株。此外,对参与产油酵母和真菌脂质代谢的结构基因进行的比较分析揭示了BCC7051中负责脂肪酸合成的代谢酶存在多种同工型。在该米曲霉菌株中还鉴定出了作为产油特征的乙酰辅酶A生成的替代途径以及苹果酸/柠檬酸/丙酮酸穿梭途径。这项工作中产生的基因组序列是用于在系统水平上扩展微生物脂质全基因组研究以及开发具有商业相关性的多样化脂质生产真菌平台的专用资源。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验