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酿酒酵母多聚腺苷酸结合蛋白在应激颗粒中的募集:不同蛋白结构域贡献的新见解。

The recruitment of the Saccharomyces cerevisiae poly(A)-binding protein into stress granules: new insights into the contribution of the different protein domains.

机构信息

Department of Biotechnology and Biosciences, University of Milano-Bicocca, Milan 20126, Italy.

出版信息

FEMS Yeast Res. 2017 Sep 1;17(6). doi: 10.1093/femsyr/fox059.

Abstract

The Saccharomyces cerevisiae poly(A)-binding protein Pab1 is a modular protein composed of four RNA recognition motifs (RRM), a proline-rich domain (P) and a C-terminus. Thanks to this modularity, Pab1 is involved in different interactions that regulate many aspects of mRNA metabolism, including the assembly of stress granules. In this work, we analyzed the contribution of each domain for the recruitment of the protein within stress granules by comparing the intracellular distribution of synthetic Pab1-GFP variants, lacking one or more domains, with the localization of the endogenous mCherry-tagged Pab1. Glucose starvation and heat shock were used to trigger the formation of stress granules. We found that Pab1 association into these aggregates relies mainly on RRMs, whose number is important for an efficient recruitment of the protein. Interestingly, although the P and C domains do not directly participate in Pab1 association to stress granules, their presence strengthens or decreases, respectively, the distribution of synthetic Pab1 lacking at least one RRM into these aggregates. In addition to describing the contribution of domains in determining Pab1 association within stress granules, the outcomes of this study suggest the modularity of Pab1 as an attractive platform for synthetic biology approaches aimed at rewiring mRNA metabolism.

摘要

酿酒酵母多聚腺苷酸结合蛋白 Pab1 是一种由四个 RNA 识别基序 (RRM)、一个富含脯氨酸的结构域 (P) 和 C 端组成的模块化蛋白。由于这种模块化,Pab1 参与了调节 mRNA 代谢的多个方面的不同相互作用,包括应激颗粒的组装。在这项工作中,我们通过比较缺乏一个或多个结构域的合成 Pab1-GFP 变体的细胞内分布与内源性 mCherry 标记的 Pab1 的定位,分析了每个结构域对蛋白质在应激颗粒中募集的贡献。葡萄糖饥饿和热休克被用来触发应激颗粒的形成。我们发现 Pab1 与这些聚集体的结合主要依赖于 RRM,其数量对于蛋白质的有效募集很重要。有趣的是,尽管 P 和 C 结构域不直接参与 Pab1 与应激颗粒的结合,但它们的存在分别增强或减弱了缺乏至少一个 RRM 的合成 Pab1 进入这些聚集体的分布。除了描述结构域在决定 Pab1 与应激颗粒内结合中的作用外,本研究的结果还表明 Pab1 的模块化是一种有吸引力的合成生物学方法平台,旨在重新布线 mRNA 代谢。

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