Luo Dan, Deng Tingting, Yuan Wei, Deng Hui, Jin Ming
Department of Ophthalmology, China-Japan Friendship Hospital, Yinghua Donglu, Chaoyang District, Beijing, 100029, China.
Beijing Changping Hospital of Chinese Medicine, South section of East Ring Road, Changping District, Beijing, 102200, China.
BMC Ophthalmol. 2017 Sep 6;17(1):165. doi: 10.1186/s12886-017-0555-7.
Age-related macular degeneration (AMD) is a leading disease associated with blindness. It has a high incidence and complex pathogenesis. We aimed to study the metabolomic characteristics in Chinese patients with wet AMD by analyzing the morning plasma of 20 healthy controls and 20 wet AMD patients for metabolic differences.
We used ultra-high-pressure liquid chromatography and quadrupole-time-of-flight mass spectrometry for this analysis. The relationship of these differences with AMD pathophysiology was also assessed. Remaining data were normalized using Pareto scaling, and then valid data were handled using multivariate data analysis with MetaboAnalysis software, including unsupervised principal component analysis and supervised partial least squares-discriminate analysis. The purpose of the present work was to identify significant metabolites for the analyses. Hierarchical clustering was conducted to identify metabolites that differed between the two groups. Significant metabolites were then identified using the established database, and features were mapped on the Kyoto Encyclopedia of Genes and Genomes.
A total of 5443 ion peaks were detected, all of them attributable to the same 10 metabolites. These included some amino acids, isomaltose, hydrocortisone, and biliverdin. The heights of these peaks differed significantly between the two groups. The biosynthesis of amino acids pathways also differed profoundly between patients with wet AMD and controls.
These findings suggested that metabolic profiles and and pathways differed between wet AMD and controls and may provide promising new targets for AMD-directed therapeutics and diagnostics.
年龄相关性黄斑变性(AMD)是一种导致失明的主要疾病。其发病率高且发病机制复杂。我们旨在通过分析20名健康对照者和20名湿性AMD患者的清晨血浆代谢差异,研究中国湿性AMD患者的代谢组学特征。
我们使用超高压液相色谱和四极杆飞行时间质谱进行此分析。还评估了这些差异与AMD病理生理学的关系。其余数据使用帕累托缩放进行归一化,然后使用MetaboAnalysis软件进行多变量数据分析处理有效数据,包括无监督主成分分析和有监督偏最小二乘判别分析。本研究的目的是识别用于分析的显著代谢物。进行层次聚类以识别两组之间不同的代谢物。然后使用已建立的数据库识别显著代谢物,并将特征映射到京都基因与基因组百科全书上。
共检测到5443个离子峰,所有这些峰均归因于相同的10种代谢物。这些代谢物包括一些氨基酸、异麦芽糖、氢化可的松和胆绿素。两组之间这些峰的高度差异显著。湿性AMD患者和对照组之间氨基酸生物合成途径也存在深刻差异。
这些发现表明,湿性AMD患者和对照组之间的代谢谱和途径不同,可能为AMD的治疗和诊断提供有前景的新靶点。