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河口岸水分离出的新种嗜水变色杆菌。

Altererythrobacter aquiaggeris sp. nov., isolated from water of an estuary bank.

作者信息

Jung Yong-Taek, Park Sooyeon, Lee Jung-Sook, Yoon Jung-Hoon

机构信息

Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon, Republic of Korea.

University of Science and Technology (UST), 113 Gwahak-ro, Yuseong-gu, Daejeon, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2017 Sep;67(9):3410-3416. doi: 10.1099/ijsem.0.002128. Epub 2017 Sep 6.

DOI:10.1099/ijsem.0.002128
PMID:28875894
Abstract

A Gram-stain-negative, oval- or short-rod-shaped and non-motile bacterial strain, designated KEM-3T, was isolated from water of Geumgang Estuary Bank, South Korea, and was subjected to a polyphasic taxonomic study. Strain KEM-3T grew optimally at pH 7.0-8.0, at 25 °C and in the presence of 2-3% (w/v) NaCl. The neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain KEM-3T fell within the clade comprising Altererythrobacter species, clustering with Altererythrobacter confluentis KEM-4T and Altererythrobacter gangjinensis KJ7T, with which it exhibited 97.3 and 96.0 % sequence similarity, respectively. The 16S rRNA gene sequence similarity values between strain KEM-3T and the type strains of other Altererythrobacter species were 92.9-95.2 %. The DNA G+C content of strain KEM-3T was determined to be 59.0 mol% and its mean DNA-DNA relatedness with A. confluentis KEM-4T was 8.6±3.1 %. Strain KEM-3T contained Q-10 as the predominant ubiquinone and summed feature 8 (C18:1ω7c and/or C18:1ω6c), C17:1ω6c and summed feature 3 (C16:1ω6c and/or C16:1ω7c) as the major fatty acids. The major polar lipids were phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, a sphingoglycolipid, an unidentified glycolipid and an unidentified phospholipid. Differential phenotypic properties, together with phylogenetic distinctiveness, demonstrated that strain KEM-3T is distinguishable from other Altererythrobacter species. On the basis of the data presented, strain KEM-3T is considered to represent a novel species of the genus Altererythrobacter, for which the name Altererythrobacter aquiaggeris sp. nov. is proposed. The type strain is KEM-3T (=KCTC 52471T=NBRC 112425T).

摘要

从韩国锦江入海口的水中分离出一株革兰氏染色阴性、椭圆形或短杆状且无运动性的细菌菌株,命名为KEM-3T,并对其进行了多相分类研究。菌株KEM-3T在pH 7.0 - 8.0、25 °C以及2 - 3%(w/v)NaCl存在的条件下生长最佳。基于16S rRNA基因序列构建的邻接法系统发育树表明,菌株KEM-3T属于包含交替红杆菌属物种的进化分支,与融合交替红杆菌KEM-4T和康津交替红杆菌KJ7T聚类,与它们的序列相似性分别为97.3%和96.0%。菌株KEM-3T与其他交替红杆菌属物种模式菌株之间的16S rRNA基因序列相似性值为92.9 - 95.2%。菌株KEM-3T的DNA G+C含量测定为59.0 mol%,其与融合交替红杆菌KEM-4T的平均DNA - DNA相关性为8.6±3.1%。菌株KEM-3T以Q - 10作为主要泛醌,以总和特征8(C18:1ω7c和/或C18:1ω6c)、C17:1ω6c和总和特征3(C16:1ω6c和/或C16:1ω7c)作为主要脂肪酸。主要极性脂类为磷脂酰胆碱、磷脂酰甘油、磷脂酰乙醇胺、一种鞘糖脂、一种未鉴定的糖脂和一种未鉴定的磷脂。不同的表型特征以及系统发育独特性表明,菌株KEM-3T可与其他交替红杆菌属物种区分开来。基于所提供的数据,菌株KEM-3T被认为代表交替红杆菌属的一个新物种,为此提出名为河口交替红杆菌(Altererythrobacter aquiaggeris sp. nov.)。模式菌株为KEM-3T(=KCTC 52471T=NBRC 112425T)。

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