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从欧美杨溃疡病有症状的树皮中分离出的短枝杨布伦纳氏菌新亚种,以及杨树布伦纳氏菌新亚种的描述

Brenneria populi subsp. brevivirga subsp. nov. isolated from symptomatic bark of Populus × euramericana canker, and description of Brenneria populi subsp. populi subsp. nov.

作者信息

Zheng Ming-Hui, Piao Chun-Gen, Xue Han, Guo Min-Wei, Li Yong

机构信息

The Key Laboratory of State Forestry Administration on Forest Protection, Research Institute of Forest Ecology Environment and Protection, Chinese Academy of Forestry, Beijing 100091, PR China.

Institute of Plant Quarantine, Chinese Academy of Inspection and Quarantine, Beijing 100176, PR China.

出版信息

Int J Syst Evol Microbiol. 2017 Sep;67(9):3633-3638. doi: 10.1099/ijsem.0.002183. Epub 2017 Sep 6.

Abstract

Two Gram-stain-negative, facultatively anaerobic, motile bacterial strains isolated from symptomatic bark of Populus × euramericana canker in China were investigated using a polyphasic approach, including 16S rRNA gene sequencing, multilocus sequence analysis, and biochemical and physiological assays. 16S rRNA gene sequencing indicated that these strains belonged to the genus Brenneria, family Pectobacteriaceae, and had the highest sequence similarity with Brenneria populi CFCC 11963T (98 %). DNA-DNA hybridization experiments revealed DNA-DNA relatedness values of 72.1-78.2 % between the new isolates and strains of B. populi, revealing that these strains belonged to the same species. The 16S rRNA gene sequencing and multilocus sequence analysis suggested that the two novel strains and those of B. populi are phylogenetically closely related but form two clearly separated subgroups. Based on the data, the two novel isolates represent a subspecies of B. populi for which the name B. populi subsp. brevivirga subsp. nov. is proposed with D8-10-4-5T (=CFCC 11935T=KCTC 42841T) as the type strain, with the automatic creation of B. populi subsp. populi subsp. nov. (type strain D9-5T=CFCC 11963T=KCTC 42088T).

摘要

从中国欧美杨溃疡病有症状的树皮中分离出两株革兰氏阴性、兼性厌氧、具运动性的细菌菌株,采用多相分类方法对其进行了研究,包括16S rRNA基因测序、多位点序列分析以及生化和生理测定。16S rRNA基因测序表明,这些菌株属于果胶杆菌科布伦纳氏菌属,与杨树布伦纳氏菌CFCC 11963T的序列相似性最高(98%)。DNA-DNA杂交实验显示,新分离菌株与杨树布伦纳氏菌菌株之间的DNA-DNA相关性值为72.1%-78.2%,表明这些菌株属于同一物种。16S rRNA基因测序和多位点序列分析表明,这两株新菌株与杨树布伦纳氏菌菌株在系统发育上密切相关,但形成两个明显分开的亚群。基于这些数据,这两株新分离菌株代表杨树布伦纳氏菌的一个亚种,为此提出名为杨树布伦纳氏菌短鞭亚种(B. populi subsp. brevivirga subsp. nov.),模式菌株为D8-10-4-5T(=CFCC 11935T=KCTC 42841T),同时自动创建杨树布伦纳氏菌杨树亚种(B. populi subsp. populi subsp. nov.)(模式菌株D9-5T=CFCC 11963T=KCTC 42088T)。

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