Bahuguna Jyotika, Tetzlaff Tom, Kumar Arvind, Hellgren Kotaleski Jeanette, Morrison Abigail
Institute of Neuroscience and Medicine (INM-6), Institute for Advanced Simulation (IAS-6), JARA Brain Institute I, Jülich Research CenterJülich, Germany.
Computational Science and Technology, School of Computer Science and Communication, KTH Royal Institute of TechnologyStockholm, Sweden.
Front Comput Neurosci. 2017 Aug 22;11:79. doi: 10.3389/fncom.2017.00079. eCollection 2017.
The classical model of basal ganglia has been refined in recent years with discoveries of subpopulations within a nucleus and previously unknown projections. One such discovery is the presence of subpopulations of arkypallidal and prototypical neurons in external globus pallidus, which was previously considered to be a primarily homogeneous nucleus. Developing a computational model of these multiple interconnected nuclei is challenging, because the strengths of the connections are largely unknown. We therefore use a genetic algorithm to search for the unknown connectivity parameters in a firing rate model. We apply a binary cost function derived from empirical firing rate and phase relationship data for the physiological and Parkinsonian conditions. Our approach generates ensembles of over 1,000 configurations, or homologies, for each condition, with broad distributions for many of the parameter values and overlap between the two conditions. However, the resulting effective weights of connections from or to prototypical and arkypallidal neurons are consistent with the experimental data. We investigate the significance of the weight variability by manipulating the parameters individually and cumulatively, and conclude that the correlation observed between the parameters is necessary for generating the dynamics of the two conditions. We then investigate the response of the networks to a transient cortical stimulus, and demonstrate that networks classified as physiological effectively suppress activity in the internal globus pallidus, and are not susceptible to oscillations, whereas parkinsonian networks show the opposite tendency. Thus, we conclude that the rates and phase relationships observed in the globus pallidus are predictive of experimentally observed higher level dynamical features of the physiological and parkinsonian basal ganglia, and that the multiplicity of solutions generated by our method may well be indicative of a natural diversity in basal ganglia networks. We propose that our approach of generating and analyzing an ensemble of multiple solutions to an underdetermined network model provides greater confidence in its predictions than those derived from a unique solution, and that projecting such homologous networks on a lower dimensional space of sensibly chosen dynamical features gives a better chance than a purely structural analysis at understanding complex pathologies such as Parkinson's disease.
近年来,随着在一个核内发现亚群以及此前未知的投射,基底神经节的经典模型得到了完善。其中一项这样的发现是,在外侧苍白球中存在古苍白球神经元和典型神经元亚群,而外侧苍白球此前被认为主要是一个同质的核。开发这些多个相互连接的核的计算模型具有挑战性,因为连接的强度在很大程度上是未知的。因此,我们使用遗传算法在发放率模型中搜索未知的连接参数。我们应用从生理和帕金森病状态下的经验发放率和相位关系数据导出的二元成本函数。我们的方法为每种状态生成了超过1000种配置或同源性的集合,许多参数值分布广泛,且两种状态之间存在重叠。然而,从典型神经元和古苍白球神经元的输入或输出连接的有效权重结果与实验数据一致。我们通过单独和累积地操纵参数来研究权重变异性 的意义,并得出结论,参数之间观察到的相关性对于生成两种状态的动力学是必要的。然后,我们研究网络对瞬态皮质刺激的反应,并证明分类为生理状态的网络有效地抑制了内侧苍白球的活动,并且不易发生振荡,而帕金森病网络则表现出相反的趋势。因此,我们得出结论,在苍白球中观察到的发放率和相位关系可预测生理和帕金森病基底神经节实验观察到的更高层次的动力学特征,并且我们的方法生成的多种解决方案可能很好地表明了基底神经节网络的自然多样性。我们提出,我们生成和分析欠定网络模型的多个解决方案集合的方法比从唯一解决方案得出的预测更能让人相信其预测,并且在合理选择的动力学特征的低维空间上投影这些同源网络比纯粹的结构分析更有可能理解帕金森病等复杂病理。